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Information on SUBCLASS 2.6.1
Subclass Accession number: 3721
Subclass: 2.6.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 23

Average sequence ID (%) : 13.4 +/- 16.6
Average RMSD (Å) : 0.570 +/- 0.284

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hXXcXX
(φψ)-conformation: bbplbb
Pattern: [FILMVWY]x[fglptv][degknrs]xx[ailpvwy]xx
Conservation:1.861-0.148-0.9351.324-0.113-1.0530.117-0.213-0.840
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aog_A_2491aog   A250258ILTKENPAKEEES--EEEbbxlbbxab
1b37_A_2311b37   A231239LQLNKVVREEESS--EEEbbxvbxxab
1d7y_A_2031d7y   A204212LRFERSVTGEEES--EEExbxvbbxae
1d7y_A_751d7y   A7684WLLGVTAQSEEET--EEEbxxvbbxae
1fec_A_2461fec   A248256VRTHENPAKEEET--EEExbxlbbxab
1fl2_A_2821fl2   A284292VIDSQSASKEE-S--EEExbbvbbxab
1g97_A_3081g97   A308315VITNSMIE.EE-S-EEE.bbxlbbbb.
1ges_A_2241ges   A225233LHTNAIPKAEE-S--EEExbxlbbwab
1gv4_A_2231gv4   A226234VLTGKKVVHEEES--EEEbbxvbbxab
1h54_A_541h54   A5563YLGGVWYPDEETT--EEEbbpvxbbwb
1jmk_C_1001jmk   C104111IMVDSYKK.EEES--EE.bbblbbxx.
1kdg_A_4201kdg   A422430FKTNVMVSNEE-S--EEEbbxlbbxab
1m6i_A_2241m6i   A227235VLTGKKVVQEEET--EEEbbxvbbxab
1m6i_A_3621m6i   A363371VMPNAIVQSEE-S--EEExbxlbbxab
1mo9_A_1521mo9   A152160YILNCPAKVEEESS--EEbbbvbxxbx
1nhp_*_2061nhp   -208216IATGETVEREEES--EEEbbxvbxxab
1p30_A_8571p30   A864872LCDRTLWRIEETT--EEEbbxlbbxbb
1pj5_A_1671pj5   A168176YRGSTTVTGEE-S--EEEbbxlbbxab
1ps9_A_5891ps9   A590598MIPGVSYQKEE-S-EEEEbbxvxbxab
1q1r_A_2071q1r   A208216IRTGTQVCGEE-S--EEExbxlbbxae
1q1r_A_751q1r   A7785LLGGTQVTAEE-S--EEEbbxlbxxab
1qcx_A_1201qcx   A120128VIKGKGLRVEEES--EEEbbbvbxbbb
1s3e_A_2291s3e   A229237VKLERPVIYEESS--EEExbxlbxxab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aog_A_2491aog   A     MAEMALEIC ACID E - 254
1aog_A_2491aog   A     MAEMALEIC ACID N - 255
1aog_A_2491aog   A     MAEMALEIC ACID P - 256
1aog_A_2491aog   A     MAEMALEIC ACID A - 257
1aog_A_2491aog   A     MAEMALEIC ACID K - 258
1b37_A_2311b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 235
1b37_A_2311b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 236
1b37_A_2311b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 237
1b37_A_2311b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 238
1d7y_A_751d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 80
1d7y_A_751d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 81
1d7y_A_751d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 82
1d7y_A_751d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 83
1fl2_A_2821fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 288
1fl2_A_2821fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 289
1fl2_A_2821fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 290
1fl2_A_2821fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 291
1gv4_A_2231gv4   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 230
1gv4_A_2231gv4   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 231
1gv4_A_2231gv4   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 232
1gv4_A_2231gv4   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 233
1kdg_A_4201kdg   A     MANALPHA-D-MANNOSE T - 421
1kdg_A_4201kdg   A     6FA6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE V - 426
1kdg_A_4201kdg   A     6FA6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE M - 427
1kdg_A_4201kdg   A     6FA6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE V - 428
1kdg_A_4201kdg   A     6FA6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE S - 429
1kdg_A_4201kdg   A     NAGN-ACETYL-D-GLUCOSAMINE N - 434
1m6i_A_2241m6i   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 232
1m6i_A_2241m6i   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 234
1mo9_A_1521mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 156
1mo9_A_1521mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 157
1mo9_A_1521mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 158
1mo9_A_1521mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 159
1pj5_A_1671pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 172
1pj5_A_1671pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 173
1pj5_A_1671pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 174
1pj5_A_1671pj5   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 175
1ps9_A_5891ps9   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 596
1q1r_A_751q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 82
1q1r_A_751q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 83
1q1r_A_751q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 84
1s3e_A_2291s3e   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 233
1s3e_A_2291s3e   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 234
1s3e_A_2291s3e   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 235
1s3e_A_2291s3e   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 236

Clusters included in this Subclass
CLUSTER: AR.2.49
CLUSTER: AR.3.25
CLUSTER: AR.4.21