Information on SUBCLASS 5.1.2 |
Subclass Accession number: 9092
Subclass: 5.1.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 13.0 +/- 15.0 Average RMSD (Å) : 0.807 +/- 0.256 Consensus geometry
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Consensus Sequence: | XXcpXhpXX |
(φψ)-conformation: | aalbpppaa |
Pattern: | x | [acfklt] | x | x | x | [DGKNS] | [egkrst] | x | [ILPTV] | [DENPST] | x | [adeknr] | x | [afiklmv] | [adekrt] |
Conservation: | -0.849 | -0.279 | -0.567 | -0.865 | -0.870 | 2.104 | 0.378 | -0.624 | 1.544 | 1.775 | -0.690 | -0.247 | -0.169 | -0.557 | -0.084 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ak2_*_60 | 1ak2 | - | 67 | 81 | ATMDAGKLVSDEMVL | HHHHTT----HHHHH | aaaaavxxxxaaaaa |
1axd_A_119 | 1axd | A | 119 | 133 | ISPMLGGTTDQKVVD | HHHHHT----HHHHH | aaaaagbbxxaaaaa |
1brw_A_3 | 1brw | A | 8 | 22 | AKKRDGKALTKEEIE | HHHHTT----HHHHH | aaaaavxxxxaaaaa |
1gnl_A_28 | 1gnl | A | 50 | 64 | RLRAEGKAVDHRIDR | HHHHTT----HHHHH | aaaaavbxbxaaaaa |
1gnw_A_123 | 1gnw | A | 123 | 137 | FKSIYGLTTDEAVVA | HHHHTT----HHHHH | aaaaavxxxxaaaaa |
1h16_A_116 | 1h16 | A | 121 | 135 | SCKAYNRELDPMIKK | HHHHTT----HHHHH | aaaaalbbxxaaaaa |
1i5n_A_100 | 1i5n | A | 103 | 117 | DAYKNSEEPDAASFE | HHHHTT----HHHHH | aaaaalbxxxaaaaa |
1knq_A_45 | 1knq | A | 49 | 63 | EKMASGEPLNDDDRK | HHHHTT----HHHHH | aaaaavbxxbaaaaa |
1ld8_B_600 | 1ld8 | B | 610 | 624 | SLELLDEPIPQIVAT | HHHHTT----HHHHH | aaaaalbxbwaaaaa |
1ma1_A_36 | 1ma1 | A | 53 | 67 | EARESDTDVDIKAAL | HHHHTT----HHHHH | aaaaalbxbxaaaaa |
1nd7_A_680 | 1nd7 | A | 683 | 697 | YKRMLSKKLTIKDLE | HHHHTT----HHHHH | aaaaavbxxbaaaaa |
1o17_A_3 | 1o17 | A | 8 | 22 | KKLINKSDLEINEAE | HHHHTT----HHHHH | aaaaalbxxxaaaaa |
2ak3_A_49 | 2ak3 | A | 56 | 70 | TFIDQGKLIPDDVMT | HHHHTT----HHHHH | aaaaalbxxwaaaaa |
2tpt_*_4 | 2tpt | - | 9 | 23 | RKKRDGHALSDEEIR | HHHHTT----HHHHH | aaaaavxxxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h16_A_116 | 1h16 | A | COACOA BINDING SITE FOR CHAIN A | K - 116 |
1h16_A_116 | 1h16 | A | COACOA BINDING SITE FOR CHAIN A | M - 117 |
1h16_A_116 | 1h16 | A | DT1DTL BINDING SITE FOR CHAIN A | T - 138 |
1h16_A_116 | 1h16 | A | DT1DTL BINDING SITE FOR CHAIN A | E - 139 |
Clusters included in this Subclass |
CLUSTER: HH.5.9 |
CLUSTER: HH.7.2 |