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Information on SUBCLASS 1.1.4
Subclass Accession number: 1595
Subclass: 1.1.4 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 40

Average sequence ID (%) : 6.7 +/- 10.7
Average RMSD (Å) : 0.443 +/- 0.160

Consensus geometry
d (Å): 5 delta (°): 0-45 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXXXh
(φψ)-conformation: bbabb
Pattern: xxxxxxxx
Conservation:-1.000-1.0460.6531.341-0.813-0.136-1.000-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoz_A_2441aoz   A249256FYTSDIDIEEES-EEEbxbabbxb
1aoz_A_4791aoz   A479485.LRNTVVI.EESEEEE.xbabbbb
1b37_A_2561b37   A257264YSADYVMVEEESEEEEbbbabbbx
1cg2_A_2081cg2   A208213KLSLGT..EEESEE..bbbabb..
1ci9_A_3641ci9   A368373LLTNTA..EEESEE..bbbabx..
1d2e_A_3111d2e   A311317KSLDRAE.EEESEEE.bxbabbb.
1edq_A_371edq   A3743KFAIVEV.EEESEEE.bbbabxb.
1efv_A_1321efv   A133140SDIIAIKSEEE-EEEEblxabbab
1f9v_A_4331f9v   A436442FKFDKIF.EEESEEE.bbbabbx.
1fcq_A_2651fcq   A265270YYWYKY..EEESEE..xbbabx..
1fec_A_2741fec   A275282ADYDVVMLEEESEEEEbbbabbbx
1g0u_D_1571g0u   D158165YRYNAKAIEEESEEEEbbbabbbb
1gnl_A_4431gnl   A443448.IPRVLD..EESEEE..xpabbx.
1gtr_A_3441gtr   A344350.AVIDPVK.EESSEEE.bbabxbx
1gw0_A_2551gw0   A260267MTVDSLFLEEES-EEEbxbabbxb
1gw0_A_4751gw0   A475481.RRDTTML.EESEEEE.bbabbxx
1h6l_A_1961h6l   A204211FKMNSQTEEE-SS-EEbbxabpbI
1hfu_A_2251hfu   A230237HTVDRLQIEEESBEEEbbbabbbb
1hfu_A_4231hfu   A423428.KRDVVS..EESEEE..bbabbx.
1io1_A_2761io1   A276283EDVKNVQVEEESEEEExbbabxxb
1jlr_A_2131jlr   A214219MVTAAV..EEESEE..bbbabb..
1jvn_A_1431jvn   A145150FVHSFA..EEESEE..bbbabb..
1k0g_A_1341k0g   A137144GIYDWALIEEESEEEEbbbabbbb
1k9v_F_4351k9v   F439446FVHTYRAVEEESEEEEbbbabbxb
1ka9_H_1371ka9   H140145FANSYY..EEESEE..bbbabb..
1kk1_A_2801kk1   A280285QFVEEA..EEESEE..bxbabb..
1kk8_A_2401kk8   A240246.SSRFGKF.EESSEEE.xxabxbb
1kv7_A_2621kv7   A268275VKVSELPVEEES-EEEbxbabbpb
1m6i_A_3881m6i   A389396VETDHIVAEEESEEEEbbbabbbb
1n0u_A_4411n0u   A443449EPIDDCP.EEESEEE.bwbabbx.
1n7v_A_1411n7v   A141148INTAYKAEEEESEEEExxbabbxa
1nbf_A_3401nbf   A345352EDYYDIQLEEESSEEEbxbabbxb
1o5o_A_1781o5o   A179184IYVAAL..EEESEE..bbbabb..
1pj5_A_811pj5   A8185.VSCFN...EESEE...bxabb..
1poi_A_671poi   A7075YINCYT..EEESEE..bxbabb..
1q3q_A_3451q3q   A345352GYAEVVEEEEESEEEEbbbabbbx
1qre_A_1031qre   A103109KEYAVYI.EEESEEE.bbbabbb.
1r17_A_5251r17   A531538GNIDSPYIEEE-S-EEexbabxbb
1s3e_A_2541s3e   A255262YEAKYVISEEESEEEEbbbabbbx
2pva_A_662pva   A6672.VLYDGVN.EESEEEE.bbabebb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aoz_A_4791aoz   A     CUCOPPER (II) ION N - 481
1aoz_A_4791aoz   A     C1OCU-O LINKAGE N - 481
1gw0_A_2551gw0   A     MANALPHA-D-MANNOSE V - 262
1gw0_A_2551gw0   A     O2OXYGEN MOLECULE D - 263
1gw0_A_2551gw0   A     MANALPHA-D-MANNOSE D - 263
1gw0_A_2551gw0   A     MANALPHA-D-MANNOSE S - 264
1h6l_A_1961h6l   A     CACALCIUM ION Q - 209
1h6l_A_1961h6l   A     PO4PHOSPHATE ION Q - 209
1h6l_A_1961h6l   A     CACALCIUM ION E - 211
1h6l_A_1961h6l   A     PO4PHOSPHATE ION E - 211
1hfu_A_4231hfu   A     CUCOPPER (II) ION V - 426
1jvn_A_1431jvn   A     143S-2,3-DIHYDRO-5-GLYCIN-2-YL-ISOXAZOL-3-YL-CYSTEINE V - 146
1jvn_A_1431jvn   A     143S-2,3-DIHYDRO-5-GLYCIN-2-YL-ISOXAZOL-3-YL-CYSTEINE H - 147
1jvn_A_1431jvn   A     NINICKEL (II) ION H - 147
1jvn_A_1431jvn   A     143S-2,3-DIHYDRO-5-GLYCIN-2-YL-ISOXAZOL-3-YL-CYSTEINE S - 148
1jvn_A_1431jvn   A     143S-2,3-DIHYDRO-5-GLYCIN-2-YL-ISOXAZOL-3-YL-CYSTEINE F - 149
1jvn_A_1431jvn   A     NINICKEL (II) ION F - 149
1jvn_A_1431jvn   A     143S-2,3-DIHYDRO-5-GLYCIN-2-YL-ISOXAZOL-3-YL-CYSTEINE A - 150
1kk8_A_2401kk8   A     MGMAGNESIUM ION S - 240
1kk8_A_2401kk8   A     BEFBERYLLIUM TRIFLUORIDE ION S - 240
1kk8_A_2401kk8   A     ADPADENOSINE-5'-DIPHOSPHATE S - 240
1kk8_A_2401kk8   A     GOLGLYCEROL S - 240
1kk8_A_2401kk8   A     MGMAGNESIUM ION S - 241
1kk8_A_2401kk8   A     BEFBERYLLIUM TRIFLUORIDE ION S - 241
1kk8_A_2401kk8   A     ADPADENOSINE-5'-DIPHOSPHATE S - 241
1kk8_A_2401kk8   A     BEFBERYLLIUM TRIFLUORIDE ION R - 242
1kk8_A_2401kk8   A     GOLGLYCEROL R - 242
2pva_A_662pva   A     DTDDITHIANE DIOL V - 66
2pva_A_662pva   A     DTDDITHIANE DIOL Y - 68
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_2551gw0   A GC4MAN BINDING SITE FOR CHAIN BD - 263
1h6l_A_1961h6l   A AC5ACTIVITY CA 405 BINDING SITE FOR CHAIN AE - 211

Clusters included in this Subclass
CLUSTER: AR.0.3
CLUSTER: AR.1.8
CLUSTER: AR.2.7
CLUSTER: AR.3.45