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Information on SUBCLASS 3.2.2
Subclass Accession number: 194
Subclass: 3.2.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 13.3 +/- 14.7
Average RMSD (Å) : 0.760 +/- 0.222

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: pXchXhX
(φψ)-conformation: aalppbb
Pattern: x[afgilmy]x[adeknrs]x[DGKNQ][acfgilvy]x[filtvy]xx
Conservation:-0.8430.173-0.2580.481-0.6682.137-0.319-1.0051.098-0.795-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a6q_*_1691a6q   -174183RIQNAGGSVM.HHHHTT--EE.aaaaavxbbb.
1b7g_O_381b7g   O4251IAHRRGIRIY.HHHHTT--EE.aaaaavxxbb.
1chu_A_2231chu   A227236MAWRAGCRVA.HHHHTT--EE.aaaaagxxbb.
1e5x_A_3661e5x   A371381ALKKCNGIVEEHHHHTT--EEEaaaaalxbbbb
1f8r_A_961f8r   A101111YIRKFDLRLNEHHHHTT--EEEaaaaalxbbbp
1fnn_A_1081fnn   A118128HLRERDLYMFLHHHHTT--EEEaaaaalbbbxx
1h7e_A_2031h7e   A204214RLMNAGINIRTHHHHTT--EEEaaaaavxxbxb
1jnr_A_2421jnr   A246255MGLKAGAMLT.HHHHHT--EE.aaaaagxxxb.
1jzt_A_1001jzt   A108117QLNFFKVPVL.HHHHTT--EE.aaaaalxpbx.
1l3i_A_1461l3i   A146156CLRDLGFDVNIHHHHTT---EEaaaaavxxxbb
1lwd_A_2361lwd   A238248DFDKYKIWYEHHHHHTT--EEEaaaaalbbbbx
1m66_A_1071m66   A112122YAKEKQVPVLVHHHHHT--EEEaaaaalxwbbx
1nki_A_711nki   A8090QLRAHGVREWKHHHHTT--EEEaaaaavxxxab
1o63_A_181o63   A1828YLKKTGVIFERHHHHHT--EEEaaaaagxbxab
1p1j_A_761p1j   A8696LANKHNVEFQTHHHHTT--EEEaaaaalxxbxb
1pzx_A_451pzx   A5060DAMRQGHTVKTHHHTTT---EEaaaaavbbxbb
1q9i_A_3441q9i   A348357VAENAGGALK.HHHHTT--EE.aaaaagxxbb.
1qba_*_2461qba   -255265RFALLGVPVQTHHHHTT--EEEaaaaavbxxba
1qo8_A_2481qo8   A259268AAKEQGIDTR.HHHHTT--EE.aaaaavxxxx.
1qo8_A_3391qo8   A343352MAKEIGASMT.HHHHTTB-EE.aaaaagxxbb.
1ro2_A_421ro2   A4959WMLEHGFNIIPHHHHTT---EEaaaaavbxbbx
1s3e_A_661s3e   A7181LAKELGLETYKHHHHTT--EEEaaaaavxbbbx
1set_A_3551set   A356365QARRANLRYR.HHHHHT-EEE.aaaaavbbbb.
1t7p_A_391t7p   A4858AEVARGGLIVFHHHHTT--EEEaaaaavxbbbb
1ukf_A_2401ukf   A250260HYNSLNYDVACHHHHTT--EEEaaaaavbpxab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e5x_A_3661e5x   A     MSESELENOMETHIONINE A - 371
1e5x_A_3661e5x   A     MSESELENOMETHIONINE L - 372
1e5x_A_3661e5x   A     MSESELENOMETHIONINE C - 375
1e5x_A_3661e5x   A     MSESELENOMETHIONINE N - 376
1e5x_A_3661e5x   A     MSESELENOMETHIONINE G - 377
1e5x_A_3661e5x   A     MSESELENOMETHIONINE I - 378
1e5x_A_3661e5x   A     MSESELENOMETHIONINE V - 379
1f8r_A_961f8r   A     NAGN-ACETYL-D-GLUCOSAMINE N - 110
1fnn_A_1081fnn   A     MGMAGNESIUM ION D - 131
1fnn_A_1081fnn   A     ADPADENOSINE-5'-DIPHOSPHATE D - 131
1jnr_A_2421jnr   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 242
1jnr_A_2421jnr   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 243
1jnr_A_2421jnr   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 246
1jzt_A_1001jzt   A     MSESELENOMETHIONINE F - 101
1jzt_A_1001jzt   A     MSESELENOMETHIONINE Y - 102
1jzt_A_1001jzt   A     MSESELENOMETHIONINE L - 105
1l3i_A_1461l3i   A     MSESELENOMETHIONINE C - 146
1l3i_A_1461l3i   A     MSESELENOMETHIONINE L - 147
1l3i_A_1461l3i   A     MSESELENOMETHIONINE R - 148
1l3i_A_1461l3i   A     MSESELENOMETHIONINE D - 149
1l3i_A_1461l3i   A     MSESELENOMETHIONINE V - 154
1l3i_A_1461l3i   A     MSESELENOMETHIONINE N - 155
1l3i_A_1461l3i   A     MSESELENOMETHIONINE I - 156
1l3i_A_1461l3i   A     MSESELENOMETHIONINE T - 157
1l3i_A_1461l3i   A     MSESELENOMETHIONINE E - 158
1nki_A_711nki   A     PPFPHOSPHONOFORMIC ACID K - 90
1o63_A_181o63   A     MSESELENOMETHIONINE Y - 18
1o63_A_181o63   A     MSESELENOMETHIONINE L - 19
1o63_A_181o63   A     MSESELENOMETHIONINE K - 20
1o63_A_181o63   A     MSESELENOMETHIONINE K - 21
1o63_A_181o63   A     MSESELENOMETHIONINE F - 26
1o63_A_181o63   A     MSESELENOMETHIONINE E - 29
1p1j_A_761p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE N - 76
1p1j_A_761p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE N - 77
1p1j_A_761p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 78
1pzx_A_451pzx   A     PLMPALMITIC ACID T - 60
1pzx_A_451pzx   A     PLMPALMITIC ACID A - 61
1q9i_A_3441q9i   A     FADFLAVIN-ADENINE DINUCLEOTIDE D - 344
1q9i_A_3441q9i   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 345
1q9i_A_3441q9i   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 348
1qo8_A_2481qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 248
1qo8_A_2481qo8   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 250
1qo8_A_2481qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 253
1qo8_A_3391qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE D - 339
1qo8_A_3391qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 340
1qo8_A_3391qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 343
1ro2_A_421ro2   A     ZNZINC ION W - 49
1ro2_A_421ro2   A     ZNZINC ION E - 52
1ro2_A_421ro2   A     ZNZINC ION H - 53

Clusters included in this Subclass
CLUSTER: HE.3.29
CLUSTER: HE.4.17
CLUSTER: HE.5.13