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Information on SUBCLASS 1.1.5
Subclass Accession number: 2029
Subclass: 1.1.5 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 29

Average sequence ID (%) : 10.5 +/- 13.4
Average RMSD (Å) : 0.472 +/- 0.189

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: hXphX
(φψ)-conformation: aapaa
Pattern: xxx[afilvy]x[cdhknsty]xxxx
Conservation:-0.435-0.830-0.6790.881-0.8572.2410.522-0.436-0.7430.335
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aqu_A_2171aqu   A223232IIQHTSFQEMHHHHTSHHHHaaaaaxaaaa
1b35_B_1041b35   B104113EVLISNAMYQHHHHTSHHHHaaaaaxaaaa
1c3c_A_101c3c   A1019MKDLWTEEAKHHHHTSHHHHaaaaaxaaaa
1cke_A_881cke   A8897SGEIRTQEVAHHHHTSHHHHaaaaaxaaaa
1efu_B_801efu   B8089DFVAKDAGFQHHHHT-HHHHaaaaaxaaaa
1elk_A_831elk   A8695HVLVASQDFVHHHHTSHHHHaaaaaxaaaa
1eu8_A_3061eu8   A313322VKFVESYSVQHHHHTSHHHHaaaaaxaaaa
1ezv_A_681ezv   A7382KNIFLSKENSHHHHTSHHHHaaaaaxaaaa
1fg7_A_2471fg7   A253262AAQALSPQGIHHHHTSHHHHaaaaaxaaaa
1fmj_A_2721fmj   A278287LCEHLNFEKFHHHHT-HHHHaaaaapaaaa
1fp1_D_1341fp1   D136145TTFLCYPALLHHHHT-HHHHaaaaaxaaaa
1g38_A_3681g38   A372381VQWLNSEAMQHHHHTSHHHHaaaaaxaaaa
1glq_A_1871glq   A190199KAFLSSPEHVHHHHTSHHHHaaaaaxaaaa
1ihu_A_991ihu   A106115NEQLSGACTTHHHTSSHHHHaaaaaxaaaa
1ivy_A_3071ivy   A310319STYLNNPYVRHHHHTSHHHHaaaaaxaaaa
1iw0_A_81iw0   A2130EKAEHSTFMSHHHHT-HHHHaaaaapaaaa
1j99_A_2081j99   A214223ILKNSSFQSMHHHHT-HHHHaaaaaxaaaa
1k9x_A_431k9x   A5867HELLLHPEFVHHHHT-HHHHaaaaapaaaa
1mq4_A_3741mq4   A375384REVLEHPWITHHHHT-HHHHaaaaaxaaaa
1mwq_A_681mwq   A7382DWAAQDPYVEHHHHT-HHHHaaaaapaaaa
1nye_D_7311nye   D740749KAKAGCPVSQHHHHHSHHHHaaaaaxaaaa
1nz6_A_471nz6   A5766AVLVVHPDKAHHHHS-HHHHaaaaapaaaa
1o0w_A_781o0w   A8594KSAAASEEVLHHHHTSHHHHaaaaaxaaaa
1ocs_A_1211ocs   A136145QSVAGHPLLQHHHHT-HHHHaaaaaxaaaa
1on3_A_4601on3   A472481QNAFNTPYVAHHHHSSHHHHaaaaabaaaa
1puo_A_1431puo   A154163DKIYTSPLCLHHHHTSHHHHaaaaaxaaaa
1ujk_A_791ujk   A8291HDEVGKFRFLHHHHTSHHHHaaaaabaaaa
1urs_A_2991urs   A306315VQALTSAQAQHHHHTSHHHHaaaaaxaaaa
5csm_A_65csm   A615PETVLNLQNIHHHHS-HHHHaaaaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aqu_A_2171aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE T - 227
1aqu_A_2171aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE S - 228
1aqu_A_2171aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 229
1aqu_A_2171aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Q - 230
1aqu_A_2171aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 232
1eu8_A_3061eu8   A     PTPLATINUM (II) ION K - 323
1eu8_A_3061eu8   A     PTPLATINUM (II) ION M - 327
1eu8_A_3061eu8   A     PTPLATINUM (II) ION N - 328
1fg7_A_2471fg7   A     MSESELENOMETHIONINE A - 256
1fg7_A_2471fg7   A     MSESELENOMETHIONINE Q - 260
1fg7_A_2471fg7   A     MSESELENOMETHIONINE G - 261
1fg7_A_2471fg7   A     MSESELENOMETHIONINE I - 262
1fg7_A_2471fg7   A     MSESELENOMETHIONINE V - 263
1fmj_A_2721fmj   A     HGMERCURY (II) ION Q - 276
1fmj_A_2721fmj   A     HGMERCURY (II) ION L - 278
1fmj_A_2721fmj   A     HGMERCURY (II) ION C - 279
1fmj_A_2721fmj   A     HGMERCURY (II) ION E - 280
1fmj_A_2721fmj   A     A3PADENOSINE-3'-5'-DIPHOSPHATE L - 282
1fmj_A_2721fmj   A     A3PADENOSINE-3'-5'-DIPHOSPHATE N - 283
1fmj_A_2721fmj   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 284
1fmj_A_2721fmj   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 287
1fmj_A_2721fmj   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 288
1fp1_D_1341fp1   D     HCC2',4,4'-TRIHYDROXYCHALCONE F - 135
1fp1_D_1341fp1   D     HCC2',4,4'-TRIHYDROXYCHALCONE F - 138
1ihu_A_991ihu   A     CDCADMIUM ION E - 107
1ihu_A_991ihu   A     CDCADMIUM ION Q - 108
1ihu_A_991ihu   A     CDCADMIUM ION S - 110
1ihu_A_991ihu   A     CDCADMIUM ION G - 111
1ihu_A_991ihu   A     CDCADMIUM ION A - 112
1ihu_A_991ihu   A     CDCADMIUM ION C - 113
1ihu_A_991ihu   A     CDCADMIUM ION T - 114
1ivy_A_3071ivy   A     NAGN-ACETYL-D-GLUCOSAMINE T - 307
1ivy_A_3071ivy   A     NAGN-ACETYL-D-GLUCOSAMINE A - 308
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 9
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 12
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 13
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 16
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 20
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 23
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 24
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 29
1iw0_A_81iw0   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 33
1mwq_A_681mwq   A     MSESELENOMETHIONINE L - 68
1mwq_A_681mwq   A     ZNZINC ION Y - 80
1nz6_A_471nz6   A     MSESELENOMETHIONINE K - 56
1nz6_A_471nz6   A     MSESELENOMETHIONINE A - 57
1nz6_A_471nz6   A     MSESELENOMETHIONINE V - 60
1nz6_A_471nz6   A     MSESELENOMETHIONINE V - 61
1puo_A_1431puo   A     MPD2-METHYL-2,4-PENTANEDIOL L - 153
1puo_A_1431puo   A     MPD2-METHYL-2,4-PENTANEDIOL I - 156
1ujk_A_791ujk   A     SEPPHOSPHOSERINE F - 88
1ujk_A_791ujk   A     SEPPHOSPHOSERINE R - 89
1ujk_A_791ujk   A     SEPPHOSPHOSERINE N - 92
1ujk_A_791ujk   A     IODIODIDE ION E - 93
1ujk_A_791ujk   A     IODIODIDE ION K - 96
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
5csm_A_65csm   A ACTACTIVE SITE.L - 12
5csm_A_65csm   A ACTACTIVE SITE.R - 16
5csm_A_65csm   A ACTACTIVE SITE.L - 19

Clusters included in this Subclass
CLUSTER: HH.1.17
CLUSTER: HH.2.155
CLUSTER: HH.3.17