Logo
Information on SUBCLASS 4.4.1
Subclass Accession number: 3889
Subclass: 4.4.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 45

Average sequence ID (%) : 7.7 +/- 12.0
Average RMSD (Å) : 0.742 +/- 0.290

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: hXXXXhpX
(φψ)-conformation: bbaaapbb
Pattern: xx[acfgilmtv]xxxx[acfiltv]xxxx
Conservation:-1.000-0.8821.672-0.066-0.759-0.086-0.2561.615-0.171-1.066-1.000-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a70_*_731a70   -7381.WVLTCAAYP...EEEGGG-EE...xbbaaabbx..
1acx_*_771acx   -7990GSVDCATDACNLEEEETTTS--EEexbxaaaxxxbb
1amu_A_4231amu   A425435YLGRIDNQVKI.EEEEGGGEEEE.xaexaaaxbxb.
1btk_A_481btk   A5465GSIDVEKITCVEEEEEGGGEEEEEbbbxaaaxabbb
1czp_A_751czp   A7583.YVLTCVAYP...EEEGGG-EE...xbxaaabxx..
1dj7_B_611dj7   B6372AHFRPDEVTL..EEE-GGGEEE..bbbxaaabbp..
1dxr_H_1931dxr   H194203ALIPLGFCDV..EEEEGGG-EE..bxbxaaabxx..
1et9_A_1911et9   A191201.RIDSTQFHVDV.EEETTSEEEEE.bbxaaabbbbb
1eys_H_1921eys   H193203VLLPIGFSRFD.EEEEGGG-EEE.bxbxaaabbbb.
1f1b_B_1441f1b   B144152.EFSHNVVLA...EEETTT-EE...bbxaaNxxb..
1flm_A_261flm   A2939VNTWNSYLKVL.EEEEGGG-EEE.bbbbaaaxbxb.
1fnu_A_2061fnu   A206216.TLDNKTSQIEV.EEETTTEEEEE.bbxaaabbbbb
1frd_*_751frd   -7583.FALLCVTYP...EEEGGG-EE...xbxaaabbx..
1frr_A_721frr   A7280.FVLTCIAIP...EEETTT-EE...xbxaaaxbx..
1g31_A_681g31   A6979TSLPVGQIRNV.EEEEGGG-EEE.bbbxaaabbxb.
1gsa_*_341gsa   -3646HYMEMGDLYLI.EEE-GGGEEEE.bxbbaaaxbbb.
1h2b_A_1401h2b   A141150MRTSHRSVIK..EEE-GGGEEE..bxbbaaaxbx..
1hav_A_651hav   A6677YSISAGNVVIQSEEEEGGG-EEEEbbbxaaabbbbx
1hyo_A_1061hyo   A106116AFTSQASATMH.HEEESTT-EEE.abbxaaaxbxb.
1i7n_A_1401i7n   A145156EQAEFSELNLVAEEE-GGGEEEEEbbbxaaabbbbb
1igq_A_3421igq   A343354FEANLADVKLVAEEEEGGG-EEEEbxbxaaabbxab
1iue_A_731iue   A7381.YILLCTCYP...EEEGGG-EE...xbbaaabxx..
1iz0_A_841iz0   A8594VAVPKGALLP..EEEEGGG-EE..bxbxaaaxbx..
1j48_A_771j48   A7990GSVDCATAACNLEEEETTTS--EEebbbaaaxxxbb
1jb0_E_571jb0   E5867NNFALHEVQE..EEE-GGGEEE..bbbxaaabbx..
1jj2_P_801jj2   P8493IIVTAAHLRR..EEE-GGGEEE..bxbxaaabbx..
1jwy_A_801jwy   A8190RQVKKDDANQ..EEEETTT-EE..bbbxaaaxbp..
1khc_A_2761khc   A277286SEISADKLVA..EEEEGGG-EE..bxbxaaabbx..
1kk8_A_661kk8   A6776RTVKKDDIQS..EEEEGGG-EE..bbbpaaaxbx..
1klu_D_2221klu   D222232.TVDSKSVKIEV.EEETTT-EEEE.bbxaaaxbbbb
1krh_A_791krh   A7987.YVLACQCRP...EEETTT-EE...xbbaaaxbx..
1lpl_A_2081lpl   A209218GFVRPVDVKV..EEE-GGGEEE..bbbxaaabbb..
1m4v_A_1901m4v   A190200.VIDGRNIEKME.EEEGGGEEEEE.bbxaaaxabbb
1n67_A_4241n67   A424435ALIDQQNTSIKVEE-STTT-EEEExbbbaaabbbbb
1o7j_A_1591o7j   A159168RIGSARYITK..EEEETTT-EE..bbbxaaaxbx..
1off_A_741off   A7482.YVLTCVAYP...EEETTS-EE...xbbaaabxx..
1ors_A_191ors   A2738SSVSSSYLHWYQEEE-GGG-EEEEbpbxaaaxbbbb
1rjw_A_1231rjw   A124133CRAAADYVVK..EEEEGGG-EE..bxbxaaaxbx..
1rzh_H_1881rzh   H189198RLLPMQMVKV..EEEEGGG-EE..bbbpaaabbx..
1uuf_A_1321uuf   A133142IVVHERYVLR..EEEEGGG-EE..bbbpaaabbx..
1vj1_A_1061vj1   A107117AILDGNGLEKV.EEEEGGG-EEE.bbbxaaabbxb.
1wsa_A_1571wsa   A157166EIHAAREATK..EEEETTT-EE..bbbxaaaxbx..
2mcm_*_432mcm   -4455IGCDATTSTDVTEEEETTT-EEEExbbxaaaxbbbx
2pia_*_3042pia   -304312.QIMVCVSRA...EEETTT-EE...bbxaaaxbb..
4pga_A_1644pga   A164173EIQSGRDVSK..EEEETTT-EE..bbbxaaaxbx..
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a70_*_731a70   *     FESFE2/S2 (INORGANIC) CLUSTER L - 75
1a70_*_731a70   *     FESFE2/S2 (INORGANIC) CLUSTER T - 76
1a70_*_731a70   *     FESFE2/S2 (INORGANIC) CLUSTER C - 77
1a70_*_731a70   *     FESFE2/S2 (INORGANIC) CLUSTER A - 78
1amu_A_4231amu   A     AMPADENOSINE MONOPHOSPHATE Y - 425
1amu_A_4231amu   A     AMPADENOSINE MONOPHOSPHATE G - 427
1amu_A_4231amu   A     AMPADENOSINE MONOPHOSPHATE R - 428
1czp_A_751czp   A     FESFE2/S2 (INORGANIC) CLUSTER L - 77
1czp_A_751czp   A     FESFE2/S2 (INORGANIC) CLUSTER T - 78
1czp_A_751czp   A     FESFE2/S2 (INORGANIC) CLUSTER C - 79
1czp_A_751czp   A     FESFE2/S2 (INORGANIC) CLUSTER V - 80
1dj7_B_611dj7   B     SULSULFATE ANION K - 62
1dj7_B_611dj7   B     SULSULFATE ANION H - 64
1f1b_B_1441f1b   B     ZNZINC ION F - 145
1flm_A_261flm   A     FMNFLAVIN MONONUCLEOTIDE H - 27
1flm_A_261flm   A     FMNFLAVIN MONONUCLEOTIDE L - 28
1flm_A_261flm   A     FMNFLAVIN MONONUCLEOTIDE V - 29
1flm_A_261flm   A     FMNFLAVIN MONONUCLEOTIDE N - 30
1flm_A_261flm   A     FMNFLAVIN MONONUCLEOTIDE T - 31
1flm_A_261flm   A     FMNFLAVIN MONONUCLEOTIDE W - 32
1flm_A_261flm   A     FMNFLAVIN MONONUCLEOTIDE Y - 35
1frd_*_751frd   *     FESFE2/S2 (INORGANIC) CLUSTER L - 78
1frr_A_721frr   A     FESFE2/S2 (INORGANIC) CLUSTER L - 74
1frr_A_721frr   A     FESFE2/S2 (INORGANIC) CLUSTER T - 75
1frr_A_721frr   A     FESFE2/S2 (INORGANIC) CLUSTER C - 76
1frr_A_721frr   A     FESFE2/S2 (INORGANIC) CLUSTER I - 77
1iue_A_731iue   A     FESFE2/S2 (INORGANIC) CLUSTER L - 76
1iz0_A_841iz0   A     MSESELENOMETHIONINE R - 84
1iz0_A_841iz0   A     MSESELENOMETHIONINE V - 85
1krh_A_791krh   A     FESFE2/S2 (INORGANIC) CLUSTER L - 81
1krh_A_791krh   A     FESFE2/S2 (INORGANIC) CLUSTER A - 82
1krh_A_791krh   A     FESFE2/S2 (INORGANIC) CLUSTER C - 83
1krh_A_791krh   A     FESFE2/S2 (INORGANIC) CLUSTER Q - 84
1off_A_741off   A     FESFE2/S2 (INORGANIC) CLUSTER T - 77
1off_A_741off   A     FESFE2/S2 (INORGANIC) CLUSTER C - 78
1off_A_741off   A     FESFE2/S2 (INORGANIC) CLUSTER V - 79
1vj1_A_1061vj1   A     MSESELENOMETHIONINE K - 106
1vj1_A_1061vj1   A     MSESELENOMETHIONINE A - 107
1vj1_A_1061vj1   A     MSESELENOMETHIONINE I - 108
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL I - 44
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL C - 46
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL T - 49
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL T - 50
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL S - 51
2mcm_*_432mcm   *     MPD2-METHYL-2,4-PENTANEDIOL T - 52
2pia_*_3042pia   *     FESFE2/S2 (INORGANIC) CLUSTER M - 306
2pia_*_3042pia   *     FESFE2/S2 (INORGANIC) CLUSTER V - 307
2pia_*_3042pia   *     FESFE2/S2 (INORGANIC) CLUSTER C - 308
2pia_*_3042pia   *     FESFE2/S2 (INORGANIC) CLUSTER V - 309
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1off_A_741off   A AC1FES BINDING SITE FOR CHAIN AL - 76
1off_A_741off   A AC1FES BINDING SITE FOR CHAIN AC - 78
1wsa_A_1571wsa   A AACTIVE SITE IN MONOMER A.K - 166
4pga_A_1644pga   A AS1DESCRIPTION NOT PROVIDEDK - 173

Clusters included in this Subclass
CLUSTER: AR.2.128
CLUSTER: AR.3.21
CLUSTER: AR.3.81
CLUSTER: AR.4.14
CLUSTER: AR.5.10
CLUSTER: AR.5.44
CLUSTER: AR.5.75