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Information on SUBCLASS 3.7.1
Subclass Accession number: 4719
Subclass: 3.7.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 15.5 +/- 19.3
Average RMSD (Å) : 0.380 +/- 0.132

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXXXcXX
(φψ)-conformation: aallpaa
Pattern: [acfimvwy][aflmvwy][aekqrt]xx[adegknqrs]x[dhns]x[adegknqrst]x[acfilv]
Conservation:-0.3590.341-0.101-0.684-0.8800.3220.2682.849-0.863-0.660-0.135-0.100
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a5t_*_1841a5t   -190201ALRLSAGSPGAAHHHHTTT-HHHHaaaaavvxaaaa
1aua_*_551aua   -6172FLRARKFDVQLAHHHHTTT-HHHHaaaaaUvxaaaa
1bud_A_161bud   A1829MVKKYNGDSDSIHHHHTTT-HHHHaaaaalvxaaaa
1d9c_A_671d9c   A7889FQKFLNGSSEKLHHHHSTT-HHHHaaaaalvxaaaa
1dxr_M_531dxr   M7384MAAEVHFDPLQFHHHHTTT-HHHHaaaaalvxaaaa
1e6y_B_21941e6y   B21972208VAAISNRNAMNAHHHHTTT-HHHHaaaaalvxaaaa
1efu_B_191efu   B2536ALTEANGDIELAHHHHTTT-HHHHaaaaalvxaaaa
1eto_B_501eto   B6677VMQYTLGNQTRAHHHHTTT-HHHHaaaaalvxaaaa
1etx_A_501etx   A6677VMQYTRGNATRAHHHHTTT-HHHHaaaaalvxaaaa
1fip_A_501fip   A6677VMQYTRGNQTRAHHHHTTT-HHHHaaaaalvxaaaa
1fyh_A_2671fyh   A278289NVKFFNSNKKKRHHHHTTS-HHHHaaaaallbaaaa
1fyh_A_671fyh   A7889NVKFFNSNKKKRHHHHHTT-HHHHaaaaallxaaaa
1g3k_A_501g3k   A6374KLEMHQGHLLKSHHHHTTT-HHHHaaaaalvxaaaa
1g3m_A_501g3m   A5869YMIYKEGDVEKCHHHHTTT-HHHHaaaaalvxaaaa
1j0h_A_4281j0h   A428439ILTVCGGDIRKVHHHHTTT-HHHHaaaaavvxaaaa
1kuf_A_181kuf   A2031MYTKYSSNFKKIHHHHTTT-HHHHaaaaallbaaaa
1m4y_A_501m4y   A6374KLREWGGNLTKAHHHHTTT-HHHHaaaaalvxaaaa
1nd1_A_161nd1   A1829IFTKYNSNLNTIHHHHTTT-HHHHaaaaallbaaaa
1o6u_A_351o6u   A4152WLRARSFDLQKSHHHHTTT-HHHHaaaaallxaaaa
1oai_A_5821oai   A588599CLQDNNWDYTRSHHHHTTT-HHHHaaaaavlbaaaa
1qsa_A_5231qsa   A537548VYQQFGNNRIFSHHHHTTS-HHHHaaaaavlbaaaa
1qua_A_161qua   A1829MYAKYNSNSSKIHHHHTTT-HHHHaaaaavlbaaaa
1r5l_A_491r5l   A5566FLRARDFDLDLAHHHHTTT-HHHHaaaaalvxaaaa
1rzh_M_541rzh   M7485FWYQAGWNPAVFHHHHTTT-HHHHaaaaavlxaaaa
4aig_*_164aig   -1829VFMKYNSDLNIIHHHHTTT-HHHHaaaaallbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aua_*_551aua   *     BOGB-OCTYLGLUCOSIDE R - 60
1aua_*_551aua   *     BOGB-OCTYLGLUCOSIDE R - 63
1aua_*_551aua   *     BOGB-OCTYLGLUCOSIDE A - 64
1aua_*_551aua   *     BOGB-OCTYLGLUCOSIDE K - 66
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE A - 53
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE S - 54
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE A - 57
1dxr_M_531dxr   M     BPBBACTERIOPHEOPHYTIN B A - 58
1dxr_M_531dxr   M     BPBBACTERIOPHEOPHYTIN B F - 59
1dxr_M_531dxr   M     BPBBACTERIOPHEOPHYTIN B A - 60
1dxr_M_531dxr   M     BCBBACTERIOCHLOROPHYLL B F - 61
1dxr_M_531dxr   M     BPBBACTERIOPHEOPHYTIN B F - 61
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 61
1dxr_M_531dxr   M     BCBBACTERIOCHLOROPHYLL B G - 62
1dxr_M_531dxr   M     BPBBACTERIOPHEOPHYTIN B G - 62
1dxr_M_531dxr   M     BCBBACTERIOCHLOROPHYLL B S - 63
1dxr_M_531dxr   M     BPBBACTERIOPHEOPHYTIN B S - 63
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE T - 64
1dxr_M_531dxr   M     BCBBACTERIOCHLOROPHYLL B A - 65
1dxr_M_531dxr   M     BCBBACTERIOCHLOROPHYLL B I - 66
1dxr_M_531dxr   M     BPBBACTERIOPHEOPHYTIN B I - 66
1dxr_M_531dxr   M     NS5DIHYDRO-NEUROSPORENE I - 66
1dxr_M_531dxr   M     BPBBACTERIOPHEOPHYTIN B L - 67
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE L - 67
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE I - 68
1dxr_M_531dxr   M     BCBBACTERIOCHLOROPHYLL B I - 69
1dxr_M_531dxr   M     NS5DIHYDRO-NEUROSPORENE I - 69
1dxr_M_531dxr   M     NS5DIHYDRO-NEUROSPORENE L - 70
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 71
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE N - 72
1dxr_M_531dxr   M     NS5DIHYDRO-NEUROSPORENE M - 73
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE A - 75
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE E - 76
1dxr_M_531dxr   M     LDALAURYL DIMETHYLAMINE-N-OXIDE F - 79
1e6y_B_21941e6y   B     OCSCYSTEINESULFONIC ACID R - 2203
1e6y_B_21941e6y   B     OCSCYSTEINESULFONIC ACID N - 2204
1e6y_B_21941e6y   B     OCSCYSTEINESULFONIC ACID A - 2205
1e6y_B_21941e6y   B     OCSCYSTEINESULFONIC ACID M - 2206
1g3m_A_501g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE T - 50
1g3m_A_501g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL T - 50
1g3m_A_501g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE T - 51
1g3m_A_501g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE W - 52
1kuf_A_181kuf   A     CDCADMIUM ION H - 18
1kuf_A_181kuf   A     CDCADMIUM ION Y - 21
1kuf_A_181kuf   A     CDCADMIUM ION T - 22
1kuf_A_181kuf   A     CDCADMIUM ION H - 36
1kuf_A_181kuf   A     CDCADMIUM ION S - 40
1o6u_A_351o6u   A     MSESELENOMETHIONINE R - 40
1o6u_A_351o6u   A     MSESELENOMETHIONINE W - 41
1o6u_A_351o6u   A     MSESELENOMETHIONINE L - 42
1o6u_A_351o6u   A     MSESELENOMETHIONINE A - 44
1o6u_A_351o6u   A     MSESELENOMETHIONINE R - 45
1o6u_A_351o6u   A     MSESELENOMETHIONINE Q - 50
1o6u_A_351o6u   A     MSESELENOMETHIONINE K - 51
1o6u_A_351o6u   A     MSESELENOMETHIONINE S - 52
1o6u_A_351o6u   A     MSESELENOMETHIONINE E - 53
1qsa_A_5231qsa   A     GOLGLYCEROL Y - 533
1qsa_A_5231qsa   A     GOLGLYCEROL R - 545
1qsa_A_5231qsa   A     GOLGLYCEROL A - 551
1qsa_A_5231qsa   A     GOLGLYCEROL Y - 552
1qsa_A_5231qsa   A     GOLGLYCEROL N - 553
1r5l_A_491r5l   A     VIV(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL W - 76
1rzh_M_541rzh   M     PO4PHOSPHATE ION S - 54
1rzh_M_541rzh   M     PO4PHOSPHATE ION L - 55
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A S - 59
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A L - 60
1rzh_M_541rzh   M     U10UBIQUINONE-10 L - 60
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A F - 61
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A S - 62
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A G - 63
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A L - 64
1rzh_M_541rzh   M     BCLBACTERIOCHLOROPHYLL A W - 66
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A W - 66
1rzh_M_541rzh   M     SPOSPHEROIDENE W - 66
1rzh_M_541rzh   M     BCLBACTERIOCHLOROPHYLL A F - 67
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A F - 67
1rzh_M_541rzh   M     SPOSPHEROIDENE F - 67
1rzh_M_541rzh   M     BPHBACTERIOPHEOPHYTIN A F - 68
1rzh_M_541rzh   M     SPOSPHEROIDENE F - 68
1rzh_M_541rzh   M     SPOSPHEROIDENE I - 70
1rzh_M_541rzh   M     SPOSPHEROIDENE G - 71
1rzh_M_541rzh   M     SPOSPHEROIDENE I - 72
1rzh_M_541rzh   M     BCLBACTERIOCHLOROPHYLL A F - 74
1rzh_M_541rzh   M     SPOSPHEROIDENE F - 74
1rzh_M_541rzh   M     SPOSPHEROIDENE W - 75
1rzh_M_541rzh   M     SPOSPHEROIDENE F - 85
1rzh_M_541rzh   M     GOLGLYCEROL L - 86
1rzh_M_541rzh   M     GOLGLYCEROL R - 87

Clusters included in this Subclass
CLUSTER: HH.3.29
CLUSTER: HH.4.18