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Information on SUBCLASS 5.1.6
Subclass Accession number: 7924
Subclass: 5.1.6 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 14.5 +/- 15.7
Average RMSD (Å) : 0.609 +/- 0.339

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXpXpcXXX
(φψ)-conformation: bbpaagpbb
Pattern: [agilmy]xx[adnqst]x[DEHNS][AGNS]xx[afgiktv][lmpy]
Conservation:-0.577-0.848-0.2300.088-0.4581.3892.380-0.725-0.567-0.4850.033
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a1r_A_1291a1r   A131141YLVTRHADVIPEEE-TTS-EEEbxbxaavxbbw
1e4e_A_2861e4e   A293303MFLQDNGRIVLEEE-TT--EEEbbbxaavxxbx
1e6y_B_22791e6y   B22822292DKTAPSGYNFYEEE-TTS-EEEabbxaavxxxx
1h8e_A_521h8e   A5262MVEFSSGLKGMEEEETTS-EEExbbxaagpbbb
1igw_A_2531igw   A255265GERTSEGFFRTEEE-TTS-EEEgxbxaavxbxb
1k8t_A_4751k8t   A477487MAKNVEGVLKPEEEESSSSEEExbbxaagbxbx
1k8w_A_2901k8w   A295305GEIDDEGRVAPEEE-TTS-EEEbbxxaavbpxw
1m4l_A_331m4l   A3848IGRSYEGRPIYEEE-TTS-EEEaebxaavxxbb
1p1j_A_1141p1j   A117127LGIDAEGNDVYEEE-TTS-EEEaebxaavbpbb
1rlv_A_1181rlv   A120130AVVDEESEITYEEE-TTS-EEExxbxaavxbbx
2ptd_*_652ptd   -7080GRLTDDNTIVLEEE-TTS-EEEbbxbaavbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE R - 290
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID R - 290
1e4e_A_2861e4e   A     MGMAGNESIUM ION R - 290
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE D - 292
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID D - 292
1e4e_A_2861e4e   A     MGMAGNESIUM ION D - 292
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE F - 294
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE N - 304
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID N - 304
1e4e_A_2861e4e   A     MGMAGNESIUM ION N - 304
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE E - 305
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID E - 305
1e4e_A_2861e4e   A     MGMAGNESIUM ION E - 305
1e4e_A_2861e4e   A     MGMAGNESIUM ION V - 306
1e4e_A_2861e4e   A     ADPADENOSINE-5'-DIPHOSPHATE N - 307
1e4e_A_2861e4e   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID N - 307
1e4e_A_2861e4e   A     MGMAGNESIUM ION N - 307
1h8e_A_521h8e   A     GOLGLYCEROL M - 62
1igw_A_2531igw   A     HGMERCURY (II) ION S - 259
1igw_A_2531igw   A     HGMERCURY (II) ION E - 260
1igw_A_2531igw   A     HGMERCURY (II) ION G - 261
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e4e_A_2861e4e   A AC1PHY BINDING SITE FOR CHAIN AR - 290
2ptd_*_652ptd   * ACTACTIVE SITE.H - 82

Clusters included in this Subclass
CLUSTER: HA.4.31
CLUSTER: HA.6.20