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Information on SUBCLASS 1.1.9
Subclass Accession number: 945
Subclass: 1.1.9 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 42

Average sequence ID (%) : 8.2 +/- 12.7
Average RMSD (Å) : 0.548 +/- 0.182

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: XhXXX
(φψ)-conformation: bbpaa
Pattern: x[acfgilmptv]xxxx[acilmvwy]
Conservation:-0.7820.686-0.374-0.7160.491-1.0281.723
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1af7_*_1951af7   -197203RVRQELAEE-HHHHbxxaaaa
1ayo_A_541ayo   A5561IPLKPTVEE-HHHHbxxaaaa
1b9m_A_761b9m   A7783VLTRYGQEE-HHHHbxxaaaa
1bu6_O_1981bu6   O198204DWDDKMLEE-HHHHbpbaaaa
1cfy_A_71cfy   A713AVADESLEE-HHHHxxpaaaa
1dm9_A_851dm9   A8692EETAESVEE-HHHHbxxaaaa
1eb6_A_991eb6   A101107ANCDIYYEE-HHHHbxxaaaa
1ekm_A_6611ekm   A662668AMTTSEAEE-HHHHbbxaaaa
1f7s_A_91f7s   A915AVHDDCKEE-HHHHxbxaaaa
1gk8_A_3081gk8   A308314GIHFRVLEE-HHHHebxaaaa
1gny_A_1481gny   A154160NVSAEFKEE-HHHHbbxaaaa
1gp6_A_2671gp6   A270276HIGDTLEEE-HHHHbxbaaaa
1gr0_A_3351gr0   A335341GPVIPASEE-HHHHexxaaaa
1gu7_A_571gu7   A6672PVNPSDIEE-HHHHxbbaaaa
1gzg_A_2801gzg   A283289YQVSGEYEE-HHHHxxxaaaa
1hh1_A_661hh1   A6773YVRREQAEE-HHHHbbxaaaa
1hlw_A_101hlw   A1420AVKPDGVEE-HHHHbxxaaaa
1ia9_A_16411ia9   A16471653SFLPEVIEE-HHHHbxxaaaa
1itw_A_4551itw   A460466QAKDAPIEE-HHHHbbxaaaa
1j1n_A_3601j1n   A362368VFKDSVLEE-HHHHbxxaaaa
1kjw_A_4861kjw   A488494IPSKRRVEE-HHHHbxxaaaa
1msw_D_2431msw   D245251ELAPEYAEE-HHHHbxxaaaa
1nth_A_4351nth   A435441TPTEEYMEE-HHHHbxxaaaa
1odm_A_2491odm   A252258NCGSYMAEE-HHHHbxbaaaa
1oew_A_2681oew   A271277VIPGDYIEE-HHHHbxwaaaa
1oi0_A_51oi0   A511KISRGLLEE-HHHHbbxaaaa
1omw_A_5111omw   A511517LTISERWEE-HHHHbbbaaaa
1p9y_A_121p9y   A1824TIAADSIEE-HHHHbbxaaaa
1pbt_A_1671pbt   A169175TLTFRALEE-HHHHbxxaaaa
1q6o_A_311q6o   A3339EVGTILCEE-HHHHxxxaaaa
1qs1_A_1641qs1   A164170TINSDAMEE-HHHHbxpaaaa
1r3s_A_1511r3s   A155161AGAPWTLEE-HHHHbxxaaaa
1r61_A_1211r61   A121127FVAEDAAEE-HHHHbxxaaaa
1rjw_A_271rjw   A3642GVCHTDLEE-HHHHxbbaaaa
1s3i_A_641s3i   A6470QALPEVVEE-HHHHbxxaaaa
1sbp_*_2221sbp   -224230SVVDKVVEE-HHHHbxxaaaa
1ual_A_611ual   A6167LMMVQPLEE-HHHHbxxaaaa
1v4e_A_931v4e   A9399KETINFMEE-HHHHbxpaaaa
1v6s_A_1621v6s   A163169YAGFLMEEE-HHHHbxxaaaa
1vdk_A_3921vdk   A392398EPNLERIEE-HHHHbxbaaaa
1vj0_A_331vj0   A4147GVCGSDVEE-HHHHxxxaaaa
1vjp_A_3411vjp   A341347GTVYPVNEE-HHHHebbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayo_A_541ayo   A     NAGN-ACETYL-D-GLUCOSAMINE L - 57
1ayo_A_541ayo   A     NAGN-ACETYL-D-GLUCOSAMINE T - 60
1b9m_A_761b9m   A     MSESELENOMETHIONINE Y - 81
1b9m_A_761b9m   A     MSESELENOMETHIONINE L - 85
1b9m_A_761b9m   A     MSESELENOMETHIONINE F - 100
1b9m_A_761b9m   A     MSESELENOMETHIONINE D - 101
1b9m_A_761b9m   A     MSESELENOMETHIONINE S - 104
1gk8_A_3081gk8   A     EGLETHYLENE GLYCOL H - 310
1gk8_A_3081gk8   A     EGLETHYLENE GLYCOL F - 311
1gk8_A_3081gk8   A     HYP4-HYDROXYPROLINE L - 318
1gk8_A_3081gk8   A     HYP4-HYDROXYPROLINE R - 319
1gk8_A_3081gk8   A     HYP4-HYDROXYPROLINE M - 320
1gk8_A_3081gk8   A     HYP4-HYDROXYPROLINE S - 321
1gp6_A_2671gp6   A     SINSUCCINIC ACID H - 270
1gp6_A_2671gp6   A     FE2FE (II) ION H - 270
1gp6_A_2671gp6   A     DH2(2S,3S)-2-(3,4-DIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-2,3-DIHYDRO-4H-CHROMEN-4-ONE D - 273
1gzg_A_2801gzg   A     LAF5-FLUOROLEVULINIC ACID Y - 283
1gzg_A_2801gzg   A     LAF5-FLUOROLEVULINIC ACID Q - 284
1gzg_A_2801gzg   A     LAF5-FLUOROLEVULINIC ACID V - 285
1gzg_A_2801gzg   A     LAF5-FLUOROLEVULINIC ACID S - 286
1gzg_A_2801gzg   A     LAF5-FLUOROLEVULINIC ACID G - 287
1ia9_A_16411ia9   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER I - 1644
1ia9_A_16411ia9   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER I - 1645
1ia9_A_16411ia9   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER K - 1646
1odm_A_2491odm   A     FE2FE (II) ION N - 252
1pbt_A_1671pbt   A     FMTFORMIC ACID A - 174
1q6o_A_311q6o   A     MGMAGNESIUM ION E - 33
1q6o_A_311q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE E - 33
1q6o_A_311q6o   A     MGMAGNESIUM ION V - 34
1q6o_A_311q6o   A     MGMAGNESIUM ION G - 35
1q6o_A_311q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE G - 35
1q6o_A_311q6o   A     MGMAGNESIUM ION T - 36
1q6o_A_311q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE T - 36
1q6o_A_311q6o   A     LG6L-GULURONIC ACID 6-PHOSPHATE I - 37
1r3s_A_1511r3s   A     1CPCOPROPORPHYRIN I F - 154
1r3s_A_1511r3s   A     1CPCOPROPORPHYRIN I T - 160
1r3s_A_1511r3s   A     1CPCOPROPORPHYRIN I Y - 164
1rjw_A_271rjw   A     ZNZINC ION C - 38
1rjw_A_271rjw   A     ETFTRIFLUOROETHANOL C - 38
1rjw_A_271rjw   A     ZNZINC ION H - 39
1rjw_A_271rjw   A     ZNZINC ION T - 40
1rjw_A_271rjw   A     ETFTRIFLUOROETHANOL T - 40
1rjw_A_271rjw   A     ZNZINC ION D - 41
1vj0_A_331vj0   A     ZNZINC ION C - 43
1vj0_A_331vj0   A     ZNZINC ION G - 44
1vj0_A_331vj0   A     ZNZINC ION S - 45
1vj0_A_331vj0   A     ZNZINC ION D - 46
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gny_A_1481gny   A AC1NA BINDING SITE FOR CHAIN AN - 154
1gu7_A_571gu7   A CC3SO4 BINDING SITE FOR CHAIN AN - 68
1gu7_A_571gu7   A CC3SO4 BINDING SITE FOR CHAIN AP - 69
1gu7_A_571gu7   A CC3SO4 BINDING SITE FOR CHAIN AS - 70
1gzg_A_2801gzg   A LA2LAF BINDING SITE FOR CHAIN AY - 283
1gzg_A_2801gzg   A LA2LAF BINDING SITE FOR CHAIN AS - 286
1oew_A_2681oew   A AC7SO4 BINDING SITE FOR CHAIN AA - 268
1oew_A_2681oew   A AC7SO4 BINDING SITE FOR CHAIN AR - 269
1rjw_A_271rjw   A ZN2CATALYTIC ZINC SITE, CHAIN AC - 38

Clusters included in this Subclass
CLUSTER: EH.0.5
CLUSTER: EH.2.12