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Information on SUBCLASS 2.1.13
Subclass Accession number: 7135
Subclass: 2.1.13 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 11.5 +/- 18.4
Average RMSD (Å) : 0.633 +/- 0.167

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhXpXX
(φψ)-conformation: bbabaa
Pattern: x[hnqstwy][flptv]x[dhksty][dprs]xx[afiltv]xx[afgitv]
Conservation:0.7070.4301.291-0.0450.7220.916-1.6070.2790.594-0.440-1.312-1.536
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bjn_A_2991bjn   A302313FQLADSALDKLFEEESSGGGHHHHbbxabaaaaaaa
1ejb_A_521ejb   A5566ETVPGSYELPWGEE-SSGGGHHHHbbbabaaaaaaa
1gyt_A_1561gyt   A159170FNVPTRRELTSGEE-SSGGGHHHHxxbabaaaaaaa
1hl2_A_1851hl2   A186197LYNGYDEIFASGEEE--GGGHHHHbxxaxaaaaaaa
1j6u_A_4021j6u   A403414YFVEKLPELEKVEE--SGGGHHHHbbbaxaaaaaaa
1kz1_A_541kz1   A5768ESVPGSWELPQGEE-SSGGGHHHHbbbabaaaaaaa
1pk9_A_151pk9   A1728LMPGDPLRAKYIEE-SSTHHHHHHxbxaxaaaaaaa
1qht_A_781qht   A8596LYFNHPQDVPAIEE-S-TTHHHHHxxbabaaaaaaa
1rdr_*_4031rdr   -403413.WTKDPRNTQDH.EES-TTSHHHH.bbabaaaaaaa
1t7p_A_6001t7p   A601612VHVRSPHAALNTEE---GGGHHHHbpxabaaaaaaa
1tgo_A_781tgo   A8596LYFTHPQDVPAIEE-S-TTHHHHHxxbabaaaaaaa
2scu_A_2712scu   A271282KTVRSLADIGEAEE-SSGGGHHHHxxbabaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ejb_A_521ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID P - 58
1ejb_A_521ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID G - 59
1ejb_A_521ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID S - 60
1ejb_A_521ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID Y - 61
1ejb_A_521ejb   A     INJ5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN-5-YL)-1-PENTYL-PHOSPHONIC ACID E - 62
1hl2_A_1851hl2   A     3PY3-HYDROXYPYRUVIC ACID G - 189
1j6u_A_4021j6u   A     MSESELENOMETHIONINE F - 404
1pk9_A_151pk9   A     PO4PHOSPHATE ION M - 18
1pk9_A_151pk9   A     PO4PHOSPHATE ION P - 19
1pk9_A_151pk9   A     PO4PHOSPHATE ION G - 20
1pk9_A_151pk9   A     2FA2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL G - 20
1pk9_A_151pk9   A     PO4PHOSPHATE ION D - 21
1t7p_A_6001t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE N - 611
1t7p_A_6001t7p   A     2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE Q - 615
1t7p_A_6001t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE Q - 615

Clusters included in this Subclass
CLUSTER: EH.5.16
CLUSTER: EH.6.13