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Information on SUBCLASS 8.3.1
Subclass Accession number: 4190
Subclass: 8.3.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 32

Average sequence ID (%) : 35.6 +/- 26.3
Average RMSD (Å) : 0.397 +/- 0.173

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pphpXXpXPhXh
(φψ)-conformation: bpppplabaapb
Pattern: [cehknqrstwy][deknrt][acstv]x[dekpqt]x[aekqrs]x[p][fhwy][mq][alv]x[ilv]
Conservation:-0.868-0.2530.003-0.807-0.7300.085-0.427-0.9312.8041.1680.1710.186-0.7350.334
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7s_*_51a7s   -518RKARPRQFPFLASIEE--TTSSTTEEEEbxxxpvabaaxbbb
1azz_A_201azz   A2033VEAVPNSWPHQAALEE--TTSSTTEEEEbxxxplabaaxbbb
1bio_*_201bio   -2033REAEAHARPYMASVEE--TTS-TTEEEEbxxxpvabaaxbbx
1bru_P_201bru   P2033EDARPNSWPWQVSLEE--TTSSTTEEEEbpxxpvabaaxbbx
1cgh_A_201cgh   A2033RESRPHSRPYMAYLEE--TTSSTTEEEEbxxxwvabaaxbbb
1ddj_A_5661ddj   A566579CVAHPHSWPWQVSLEE--TTSSTTEEEEbxxxwvabaapbbx
1eax_A_201eax   A2033TDADEGEWPWQVSLEE--TTSSTTEEEEbxxxxvabaaxbbb
1ekb_B_201ekb   B2033SDSREGAWPWVVALEE--TTS-TTEEEEbxxxpvabaaxbxb
1eq9_A_201eq9   A2033KDAPVGKYPYQVSLEE--TTS-TTEEEEbxxxxvabaaxbbx
1euf_A_201euf   A2033HEAKPHSRPYMAFLEE--TTS-TTEEEEbxxxpvabaaxbbx
1f7z_A_201f7z   A2033YTCQENSVPYQVSLEE--TTS-TTEEEEbxxxpvabaaxbbx
1fjs_A_201fjs   A2033QECKDGECPWQALLEE--TTS-TTEEEEbxxxpvabaaxbbx
1fuj_A_201fuj   A2033HEAQPHSRPYMASLEE--TTS-TTEEEEbxxxwvabaaxbbx
1fxy_A_201fxy   A2033YNCKDGEVPWQALLEE--TTS-TTEEEEbxpxpvabaaxbbx
1gvz_A_201gvz   A2033WECEKHSKPWQVAVEE--TTSSTTEEEEbxxpxvabaaxbbb
1h4w_A_201h4w   A2033YTCEENSLPYQVSLEE--TTS-TTEEEEbxxxplabaaxbbx
1h8d_H_201h8d   H2033SDAEIGMSPWQVMLEE--TTS-TTEEEEbxxxxvabaaxbxx
1iau_A_201iau   A2033HEAKPHSRPYMAYLEE--TTSSTTEEEEbpxxwvabaaxbxb
1jou_B_201jou   B2033SDAEIGMSPWQVMLEE--TTSSTTEEEEbxxxxvabaaxbbx
1m9u_A_201m9u   A2033TNASPGEFPWQLSQEE--TTSSTTEEEEbxxbpvabaaxbbb
1mza_A_201mza   A2033KEVSPHSRPFMASIEE--TTSSTTEEEEbxxpwvabaaxbbx
1nn6_A_201nn6   A2033TECKPHSRPYMAYLEE--TTSSTTEEEEbxxxpvabaaxbbb
1npm_A_201npm   A2033RECIPHSQPWQAALEE--TTSSTTEEEEbpxxwvabaaxbbx
1orf_A_201orf   A2033NEVTPHSRPYMVLLEE--TTSSTTEEEEbppppvabaaxbxb
1os8_A_201os8   A2033TRAAQGEFPFMVRLEE--TTSSTTEEEEbxxxxvabaaxbxb
1p57_B_201p57   B2033RDTSLGRWPWQVSLEE--TTSSTTEEEEbxbbpvabaaxbbb
1ppf_E_201ppf   E2033RRARPHAWPFMVSLEE--TTSSTTEEEEbpxxplabaaxbbb
1s83_A_201s83   A2033YTCAANSIPYQVSLEE--TTSSTTEEEEbxxxpvabaaxbbx
1ton_*_201ton   -2033YKCEKNSQPWQVAVEE--TTS-TTEEEEbxxxplabaaxbbb
1trn_A_201trn   A2033YNCEENSVPYQVSLEE--TTS-TTEEEEbxxpplabaaxbbb
2hlc_A_202hlc   A2033YEAYTGLFPYQAGLEE--TTTSTTEEEEbxxbxgabaaxbbb
3rp2_A_203rp2   A2033VESIPHSRPYMAHLEE--TTS-TTEEEEbpxxpvabaaxbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a7s_*_51a7s   *     NAGN-ACETYL-D-GLUCOSAMINE R - 5
1a7s_*_51a7s   *     EOHETHANOL R - 8
1a7s_*_51a7s   *     EOHETHANOL P - 9
1a7s_*_51a7s   *     EOHETHANOL R - 10
1a7s_*_51a7s   *     EOHETHANOL Q - 11
1a7s_*_51a7s   *     EOHETHANOL F - 12
1a7s_*_51a7s   *     EOHETHANOL P - 13
1a7s_*_51a7s   *     EOHETHANOL F - 14
1a7s_*_51a7s   *     EOHETHANOL L - 15
1a7s_*_51a7s   *     EOHETHANOL Q - 19
1euf_A_201euf   A     NAGN-ACETYL-D-GLUCOSAMINE L - 34
1euf_A_201euf   A     NAGN-ACETYL-D-GLUCOSAMINE F - 35
1euf_A_201euf   A     NAGN-ACETYL-D-GLUCOSAMINE K - 36
1fuj_A_201fuj   A     NAGN-ACETYL-D-GLUCOSAMINE R - 27
1fuj_A_201fuj   A     FUCFUCOSE R - 27
1fuj_A_201fuj   A     FUCFUCOSE Y - 29
1gvz_A_201gvz   A     GOLGLYCEROL S - 26
1gvz_A_201gvz   A     GOLGLYCEROL W - 29
1gvz_A_201gvz   A     GOLGLYCEROL A - 32
1gvz_A_201gvz   A     GOLGLYCEROL Y - 34
1h8d_H_201h8d   H     TYSSULFONATED TYROSINE K - 36
1iau_A_201iau   A     ZNZINC ION H - 20
1iau_A_201iau   A     ZNZINC ION E - 21
1iau_A_201iau   A     ZNZINC ION A - 22
1iau_A_201iau   A     ZNZINC ION P - 24
1iau_A_201iau   A     ZNZINC ION H - 25
1iau_A_201iau   A     ZNZINC ION R - 27
1iau_A_201iau   A     NAGN-ACETYL-D-GLUCOSAMINE M - 34
1iau_A_201iau   A     NAGN-ACETYL-D-GLUCOSAMINE I - 35
1iau_A_201iau   A     NAGN-ACETYL-D-GLUCOSAMINE W - 36
1ppf_E_201ppf   E     NAGN-ACETYL-D-GLUCOSAMINE R - 20
1ppf_E_201ppf   E     NAGN-ACETYL-D-GLUCOSAMINE W - 27
1ppf_E_201ppf   E     FUCFUCOSE W - 27
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvz_A_201gvz   A AC2GOL BINDING SITE FOR CHAIN AW - 29
1gvz_A_201gvz   A AC3GOL BINDING SITE FOR CHAIN AY - 34

Clusters included in this Subclass
CLUSTER: AR.7.6