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Information on SUBCLASS 3.7.1
Subclass Accession number: 5520
Subclass: 3.7.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 15.9 +/- 17.5
Average RMSD (Å) : 0.728 +/- 0.309

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXXchX
(φψ)-conformation: aappgbb
Pattern: x[adegkqr]x[ACFILMVY]xx[cilmtv][aenpq][GNR][ACFILMTV]xx
Conservation:-0.767-0.505-0.9180.434-0.598-0.426-0.1200.7042.5960.788-0.515-0.671
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ais_A_1171ais   A118128DVVALTLPNCE.HHHHHHSTTEE.aaaaaaxxvbb.
1aog_A_931aog   A112123DEMFRDTEGLEFHHHHHHSTTEEEaaaaaabxvbbb
1bn7_A_2601bn7   A264275ARLAESLPNCKTHHHHHHSTTEEEaaaaaabxlbbb
1cf2_O_2331cf2   O237248IDVFEDTPRVILHHHHHHSTTEEEaaaaaaxxvbbb
1dih_*_161dih   -2232IQAALALEGVQ.HHHHHHSTTEE.aaaaaaxpvbb.
1ew2_A_2331ew2   A235246QEWLAKRQGARYHHHHHT-TTEEEaaaaaabxvxbb
1fec_A_911fec   A110121EGMFADTEGLTFHHHHHTSTTEEEaaaaaabpvbbb
1gpm_A_4901gpm   A498509NRIINEVNGISRHHHHHHSTTEEEaaaaaaxxgbab
1gpu_A_4861gpu   A487498LAHFRSLPNIQVHHHHHTSSS-EEaaaaaaxxlbxb
1h7s_A_1861h7s   A189200HAYCIISAGIRVHHHHHH-TT-EEaaaaaaxxvbxb
1ik6_A_1371ik6   A138149EAIFVHTPGLVVHHHHHT-TT-EEaaaaaaxxvbxb
1itz_A_4911itz   A492503LVSFRAMPNILMHHHHHSSSS-EEaaaaaaxxlbxb
1ly1_A_151ly1   A2031REFIAKNPGFYNHHHHHHSTTEEEaaaaaabpgbbx
1m0s_A_1801m0s   A184195EKELNNVAGVVTHHHHHTSTTEEEaaaaaaxpgxab
1m5h_A_1731m5h   A184194VDAISDVEGVI.HHHHHTSTTEE.aaaaaaxxvbb.
1m5h_A_2541m5h   A265276ILAATKIPGVVKHHHHTTSTTEEEaaaaaaxxgxab
1m5s_A_1731m5s   A184194VDTIAELEGTI.HHHHTTSTTEE.aaaaaaxxvbb.
1ni4_B_1331ni4   B133144AAWYGHCPGLKVHHHHHTSTT-EEaaaaaaxxvbbb
1ols_B_1511ols   B151162EAFFAHCPGIKVHHHHHT-TT-EEaaaaaabpgbbb
1q5v_A_1051q5v   A112123ADDVIAQRGVRHHHHHHHSSS-EEaaaaaapxgpbl
1q92_A_1111q92   A115126VKEMASLQNTDVHHHHHHSTTEEEaaaaaaxplbbb
1qgd_A_4781qgd   A479490VASLRVTPNMSTHHHHHTSTT-EEaaaaaaxpvxbb
1qhl_A_1501qhl   A154165KDKLEAMEGVQFHHHHHTSTT-EEaaaaaaxxvxbb
1umd_B_1341umd   B134145EAHFVHTAGLKVHHHHHTSTT-EEaaaaaaxpgbxb
1v4v_A_231v4v   A2536YLALRGIPGLKPHHHHHTSTT-EEaaaaaabpvbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dih_*_161dih   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 16
1dih_*_161dih   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 17
1dih_*_161dih   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 18
1gpm_A_4901gpm   A     PO4PHOSPHATE ION R - 509
1h7s_A_1861h7s   A     MSESELENOMETHIONINE Q - 186
1h7s_A_1861h7s   A     MSESELENOMETHIONINE V - 187
1h7s_A_1861h7s   A     MSESELENOMETHIONINE L - 188
1h7s_A_1861h7s   A     MSESELENOMETHIONINE H - 189
1h7s_A_1861h7s   A     MSESELENOMETHIONINE C - 202
1ni4_B_1331ni4   B     MSESELENOMETHIONINE W - 135
1ni4_B_1331ni4   B     MSESELENOMETHIONINE Y - 136
1q92_A_1111q92   A     DRM{[(1R,2S)-2-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL) CYCLOPENTYL]OXY}METHYLPHOSPHONIC ACID C - 129
1q92_A_1111q92   A     DRM{[(1R,2S)-2-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL) CYCLOPENTYL]OXY}METHYLPHOSPHONIC ACID T - 130
1v4v_A_231v4v   A     MSESELENOMETHIONINE P - 23
1v4v_A_231v4v   A     MSESELENOMETHIONINE V - 24
1v4v_A_231v4v   A     MSESELENOMETHIONINE Y - 25
1v4v_A_231v4v   A     MSESELENOMETHIONINE L - 26
1v4v_A_231v4v   A     MSESELENOMETHIONINE A - 27
1v4v_A_231v4v   A     MSESELENOMETHIONINE P - 32
1v4v_A_231v4v   A     MSESELENOMETHIONINE G - 33
1v4v_A_231v4v   A     MSESELENOMETHIONINE L - 34
1v4v_A_231v4v   A     MSESELENOMETHIONINE K - 35
1v4v_A_231v4v   A     MSESELENOMETHIONINE L - 37
1v4v_A_231v4v   A     MSESELENOMETHIONINE V - 38
1v4v_A_231v4v   A     MSESELENOMETHIONINE L - 39

Clusters included in this Subclass
CLUSTER: HE.2.90
CLUSTER: HE.3.119
CLUSTER: HE.4.35
CLUSTER: HE.5.60
CLUSTER: HE.6.36