Information on SUBCLASS 2.5.2 |
Subclass Accession number: 8249
Subclass: 2.5.2 ![]() Type: HE alpha-beta DB: ArchDB-EC Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 23 Average sequence ID (%) : 14.1 +/- 18.9 Average RMSD (Å) : 0.726 +/- 0.205 Consensus geometry
|
Consensus Sequence: | XXXXhX |
(φψ)-conformation: | aappbb |
Pattern: | [adeknqrst] | x | x | x | [agknqs] | [acgikltv] | [dekpr] | [afilmvwy] | [aikltv] | [afgiltv] |
Conservation: | 1.122 | -1.434 | 0.023 | -0.089 | 1.680 | -1.519 | 0.568 | 0.224 | -0.214 | -0.360 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ab4_*_403 | 1ab4 | - | 408 | 416 | TALVANPWQ. | HHHHHS-EE. | aaaaabpbx. |
1b9l_A_23 | 1b9l | A | 23 | 32 | EEEINNRQDI | HHHHHS-EEE | aaaaabxbxb |
1bry_Y_11 | 1bry | Y | 20 | 29 | NLREALPYER | HHHHTS-EEE | aaaaaxxbab |
1c4t_A_186 | 1c4t | A | 193 | 202 | EAKNSTAMLT | HHHHSS-EEE | aaaaabxxbb |
1ehw_A_61 | 1ehw | A | 66 | 75 | RYMSSGPVVA | HHHTSS-EEE | aaaaabxbbb |
1fx2_A_1075 | 1fx2 | A | 1076 | 1085 | EDRKQIDVTA | HHHHT--EEE | aaaaabbbbx |
1fx4_A_1063 | 1fx4 | A | 1064 | 1073 | EDRNQLDVTT | HHHHTS-EEE | aaaaabbbbx |
1g8p_A_60 | 1g8p | A | 64 | 73 | ALAALLPEIE | HHHHHS--EE | aaaaaxpxxx |
1jdr_A_201 | 1jdr | A | 204 | 213 | LNLLNEDWKL | HHHHHS-EEE | aaaaaxxxbx |
1jhd_A_18 | 1jhd | A | 26 | 35 | HEAESLPSVV | HHHTTS-EEE | aaaaaxwbbx |
1ji1_A_128 | 1ji1 | A | 128 | 137 | DWLKNGVMYQ | HHHHH--EEE | aaaaaxbbbx |
1k44_A_59 | 1k44 | A | 64 | 73 | EFITSGPVVA | HHTTTS-EEE | aaaaabxbbb |
1kbl_A_383 | 1kbl | A | 384 | 393 | AALKAGEVIG | HHHHHS-EEE | aaaaaxxxae |
1kkh_A_182 | 1kkh | A | 186 | 195 | EFLKNCKFLI | HHHHT--EEE | aaaaaxbbbx |
1m5y_A_396 | 1m5y | A | 416 | 425 | EQRASAYVKI | HHHHHS-EEE | aaaaaxxbbx |
1m7g_A_14 | 1m7g | A | 19 | 28 | ELRNQRGLTI | HHHTSS-EEE | aaaaabxbbb |
1m8p_A_21 | 1m8p | A | 26 | 35 | AEAESLPAVT | HHHTTS-EEE | aaaaapxxbx |
1me8_A_466 | 1me8 | A | 468 | 477 | QLQSKAKITL | HHHHH--EEE | aaaaapbbbx |
1nhk_L_60 | 1nhk | L | 65 | 74 | QFMISGPVVL | HHHTSS-EEE | aaaaabxbbx |
1np3_A_11 | 1np3 | A | 12 | 21 | SIIQGKKVAI | HHHHTS-EEE | aaaaabxbbb |
1npk_*_65 | 1npk | - | 70 | 79 | SFITSGPVVA | HHHTSS-EEE | aaaaabxbbx |
1nue_A_61 | 1nue | A | 66 | 75 | KYMNSGPVVA | HHHHSS-EEE | aaaaabxbbx |
3pvi_A_88 | 3pvi | A | 92 | 101 | AKYRQVPWIF | HHHHTS-EEE | aaaaabxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1nhk_L_60 | 1nhk | L | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | L - 63 |
1nhk_L_60 | 1nhk | L | CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE | M - 67 |
1nue_A_61 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | L - 64 |
1nue_A_61 | 1nue | A | GDPGUANOSINE-5'-DIPHOSPHATE | Y - 67 |
Clusters included in this Subclass |
CLUSTER: HE.2.30 |
CLUSTER: HE.3.31 |
CLUSTER: HE.4.37 |
CLUSTER: HE.5.67 |