Information on SUBCLASS 3.8.1 |
Subclass Accession number: 8356
Subclass: 3.8.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 37 Average sequence ID (%) : 15.5 +/- 21.2 Average RMSD (Å) : 0.857 +/- 0.166 Consensus geometry
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Consensus Sequence: | pXXXhXh |
(φψ)-conformation: | aabapbb |
Pattern: | [acfilvw] | [adekqrst] | x | [ailmvwy] | [aegknqrst] | [adegknqrst] | x | x | [ehknpqrst] | [afgiltv] | x | [fhilv] | x |
Conservation: | 0.203 | -0.152 | -0.030 | 0.520 | 0.385 | 0.213 | -1.553 | -0.467 | -0.832 | -0.146 | -0.362 | 2.773 | -0.553 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a53_*_93 | 1a53 | - | 96 | 108 | LRKIASSVSIPIL | HHHHHHH--S-EE | aaaaaaababpbb |
1aj0_*_71 | 1aj0 | - | 82 | 94 | VEAIAQRFEVWIS | HHHHHHH---EEE | aaaaaaabaxxbb |
1aop_*_375 | 1aop | - | 379 | 391 | LLEIAKIHKGDFR | HHHHHHH-SSEEE | aaaaaaaxabbbb |
1bfd_*_500 | 1bfd | - | 506 | 518 | SLQEALSAKGPVL | HHHHHHH-SS-EE | aaaaaaaxabxbb |
1bqq_M_137 | 1bqq | M | 148 | 160 | FRVWESATPLRFR | HHHHHHHSS-EEE | aaaaaaababbbb |
1chr_A_228 | 1chr | A | 231 | 243 | LRRLSDNNRVAIM | HHHHHHHS-SEEE | aaaaaaaxapxxb |
1cxv_A_110 | 1cxv | A | 121 | 133 | FKVWSDVTPLNFT | HHHHHTTSS-EEE | aaaaaaabaxbbb |
1eua_A_98 | 1eua | A | 100 | 112 | LLKAATEGTIPLI | HHHHHHHSSS-EE | aaaaaaaxabxbb |
1fbl_*_127 | 1fbl | - | 138 | 150 | FQLWSNVSPLTFT | HHHHHTTSS-EEE | aaaaaaabaxbbb |
1geh_A_261 | 1geh | A | 267 | 279 | IRDLAADYGLAIH | HHHHHHHTT-EEE | aaaaaaaxaxxxx |
1gkd_A_134 | 1gkd | A | 145 | 157 | FALWSAVTPLTFT | HHHHHTTSS-EEE | aaaaaaabaxbbb |
1gs5_A_17 | 1gs5 | A | 27 | 39 | LVNYRESHQRPLV | HHHHHTT--S-EE | aaaaaaabaxxxb |
1h5y_A_62 | 1h5y | A | 69 | 81 | VKRVAEAVSIPVL | HHHHHHH-SS-EE | aaaaaaabaxpbb |
1hfc_*_127 | 1hfc | - | 138 | 150 | FQLWSNVTPLTFT | HHHHHTTSS-EEE | aaaaaaabaxbbb |
1hp1_A_123 | 1hp1 | A | 126 | 138 | LRQQEKWAKFPLL | HHHHHHH-SS-EE | aaaaaaaxabxbb |
1hv5_A_127 | 1hv5 | A | 138 | 150 | LQVWSEVTPLTFT | HHHHHTTSS-EEE | aaaaaaabaxbbb |
1hy7_A_110 | 1hy7 | A | 121 | 133 | LKVWEEVTPLTFS | HHHHHTTSS-EEE | aaaaaaabaxbbb |
1i4n_A_92 | 1i4n | A | 94 | 106 | VRAARNLTCRPIL | HHHHHTT--S-EE | aaaaaaabaxpbx |
1i76_A_106 | 1i76 | A | 117 | 129 | FELWSVASPLIFT | HHHHHTTSS-EEE | aaaaaaabapbbb |
1jk3_A_127 | 1jk3 | A | 138 | 150 | FQVWSNVTPLKFS | HHHHHTTSS-EEE | aaaaaaabaxbbb |
1ka9_F_60 | 1ka9 | F | 67 | 79 | VARVAERVFIPLT | HHHHHTT--S-EE | aaaaaaababpbb |
1l6j_A_134 | 1l6j | A | 145 | 157 | FALWSAVTPLTFT | HHHHHHTSS-EEE | aaaaaaabaxbbb |
1l6s_A_252 | 1l6s | A | 255 | 267 | VRELRERTELPIG | HHHHHTT-SS-EE | aaaaaaabaxxbx |
1m3u_A_185 | 1m3u | A | 188 | 200 | AKRITEALAIPVI | HHHHHHH-SS-EE | aaaaaaaxaxwbb |
1mdl_*_229 | 1mdl | - | 232 | 244 | HQRIQSKLNVPVQ | HHHHHHT-SS-EE | aaaaaaabaxxxb |
1muc_A_232 | 1muc | A | 235 | 247 | QVRLNQRTPAPIM | HHHHHHH-SS-EE | aaaaaaaxabxxb |
1mxs_A_110 | 1mxs | A | 112 | 124 | ILEAGVDSEIPLL | HHHHHHH-SS-EE | aaaaaaaxaxxbb |
1oao_A_360 | 1oao | A | 360 | 372 | ISAVAECYHTRII | HHHHHTTSS-EEE | aaaaaaabapxxb |
1oth_A_145 | 1oth | A | 148 | 160 | LDTLAKEASIPII | HHHHHHH-SS-EE | aaaaaaaxabpbb |
1oy0_A_203 | 1oy0 | A | 206 | 218 | ATQITGKLTIPTV | HHHHHHH-SS-EE | aaaaaaaxaxxbb |
1p0k_A_166 | 1p0k | A | 170 | 182 | IEQICSRVSVPVI | HHHHHHH-SS-EE | aaaaaaaxaxxbb |
1pdz_*_302 | 1pdz | - | 305 | 317 | WSKMTSGTTIQIV | HHHHHHH-SSEEE | aaaaaaababxbx |
1qib_A_110 | 1qib | A | 121 | 133 | FQVWSDVTPLRFS | HHHHHTSSS-EEE | aaaaaaabapbbb |
1sml_A_93 | 1sml | A | 93 | 105 | VAELKRRTGAKVA | HHHHHHHSS-EEE | aaaaaaabaxbbb |
1ukz_*_29 | 1ukz | - | 33 | 45 | CEKLVKDYSFVHL | HHHHHHHSS-EEE | aaaaaaabaxbxb |
2ay1_A_233 | 2ay1 | A | 240 | 252 | TRLIASRIPEVLI | HHHHHHH-SSEEE | aaaaaaaxabbbb |
3pmg_A_339 | 3pmg | A | 340 | 352 | LDRVANATKIALY | HHHHHHTSSS-EE | aaaaaaabaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oao_A_360 | 1oao | A | BC3GOL BINDING SITE FOR CHAIN A | A - 362 |
Clusters included in this Subclass |
CLUSTER: HE.3.124 |
CLUSTER: HE.4.10 |
CLUSTER: HE.5.25 |
CLUSTER: HE.5.285 |
CLUSTER: HE.6.8 |