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Information on SUBCLASS 2.1.2
Subclass Accession number: 1636
Subclass: 2.1.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 6.7 +/- 10.8
Average RMSD (Å) : 0.557 +/- 0.162

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXhXpX
(φψ)-conformation: bbpabb
Pattern: xxxxx[adenpqst][dehknqrsty]xxx
Conservation:-1.000-1.000-0.464-0.282-1.2491.0431.585-1.1460.4810.033
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a12_A_1131a12   A113122GKVELQEKVVEE----S-EEbxxxbabxxa
1bco_*_2651bco   -269278DGYLHNVFVREEEE-SB-EEbbbxxabxbx
1bi5_A_181bi5   A2332GTANPANCVEEEE--S-EEEbbbbpaxxbx
1cb0_A_1071cb0   A107115.IVIIDQFID.EE---EEEE.bbxpabbbx
1dj7_B_321dj7   B3542VAAVLTEW..EEEE-SEE..xabbxabb..
1dv1_A_1981dv1   A200209MEKYLENPRHEEE--SS-EEbbxxbabxbb
1f7d_A_181f7d   A1827YDLLAAKEIHEEEE-SS-EExxbbxabxbb
1ig8_A_1511ig8   A153162LGFTFSFPASEEEE--SSEEbbbxbabxbb
1jj2_H_441jj2   H4655VELVVEKPVQEEEEE-S-EEbbxbxabxbb
1kol_A_881kol   A8895LVSVPFNV..EEE--SEE..xbxbpaxx..
1lml_*_1011lml   -101108..VRDVNWGA..EE-SS-EE..bbxaxxbx
1lns_A_6011lns   A603612IDLELPSMLTEEEE-SS-EEbxxxxabxbb
1lwd_A_51lwd   A512..IKVAKPVV..EE-SS-EE..xxbabxbx
1ml9_A_441ml9   A4451..RFIDHSII..EE-SS-EE..bxbabxxb
1mvh_A_2381mvh   A238245..QFISQYRL..EE-SS-EE..bxbabpbx
1plq_*_591plq   -5967.EYRCDHPVT.EE--SS-EE.bbbbabpbb
1po5_A_3691po5   A369376..HTVTKDTQ..EE-SS-EE..bbxabpbx
1q5h_A_241q5h   A2534YDLYSAYDYTEEEE-SS-EExxbbxabxbb
1q74_A_2641q74   A264273ALPILADEHYEEE--SEEEExbxxxabbbb
1qs1_A_1811qs1   A181189.DIKFDSYLD.EE--SS-EE.bbxxabpxb
1rh1_A_2521rh1   A254262YVEAGYTMS.EEE--SEEE.xbxxxabbp.
1sbp_*_2081sbp   -209217EIVTPSESI.EEE--SEEE.bxbxxabbb.
1set_A_1861set   A187195PMTLPSYAR.EEE--SEEE.wbbbxabbx.
1six_A_271six   A2736VDLYSAEDVEEEEE-SS-EEbxxxxabxbb
1ua4_A_1901ua4   A190197..FEAPRENR..EE-SS-EE..xbxabxbb
1uyr_A_18871uyr   A18911900VIGVETRTVEEEEE--S-EEbbbbxaxxxb
1vk4_A_641vk4   A6675VFLKSPRTTSEEEE-SS-EEbxxxbabbxb
2pva_A_472pva   A4755.VINNSYAFV.EE--SS-EE.bbxxabxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dv1_A_1981dv1   A     PO4PHOSPHATE ION E - 211
1kol_A_881kol   A     ZNZINC ION F - 93
1kol_A_881kol   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 93
1kol_A_881kol   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 94
1plq_*_591plq   *     HGMERCURY (II) ION Y - 60
1plq_*_591plq   *     HGMERCURY (II) ION R - 61
1plq_*_591plq   *     HGMERCURY (II) ION C - 62
1plq_*_591plq   *     HGMERCURY (II) ION D - 63
1plq_*_591plq   *     HGMERCURY (II) ION H - 64
1plq_*_591plq   *     HGMERCURY (II) ION P - 65
1plq_*_591plq   *     HGMERCURY (II) ION V - 66
1po5_A_3691po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 369
1q5h_A_241q5h   A     DUDDEOXYURIDINE-5'-DIPHOSPHATE D - 26
1six_A_271six   A     MGMAGNESIUM ION D - 28
1six_A_271six   A     DUP2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE D - 28
1ua4_A_1901ua4   A     AMPADENOSINE MONOPHOSPHATE R - 194
1ua4_A_1901ua4   A     AMPADENOSINE MONOPHOSPHATE E - 195
1ua4_A_1901ua4   A     AMPADENOSINE MONOPHOSPHATE N - 196
1ua4_A_1901ua4   A     GLCGLUCOSE R - 197
1ua4_A_1901ua4   A     AMPADENOSINE MONOPHOSPHATE R - 197
1ua4_A_1901ua4   A     GLCGLUCOSE I - 199
1ua4_A_1901ua4   A     GLCGLUCOSE S - 201
1vk4_A_641vk4   A     MSESELENOMETHIONINE E - 64

Clusters included in this Subclass
CLUSTER: AR.2.95
CLUSTER: AR.3.109
CLUSTER: AR.3.38
CLUSTER: AR.4.130
CLUSTER: AR.4.38
CLUSTER: AR.5.107
CLUSTER: AR.5.22
CLUSTER: AR.6.50