Information on SUBCLASS 1.2.5 |
Subclass Accession number: 5281
Subclass: 1.2.5 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 46 Average sequence ID (%) : 10.7 +/- 14.6 Average RMSD (Å) : 0.507 +/- 0.195 Consensus geometry
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Consensus Sequence: | pXXhX |
(φψ)-conformation: | aalbb |
Pattern: | x | [adegknqrst] | [dehknqrsty] | x | [adgknqrs] | [acfgikltv] | x | x |
Conservation: | -1.124 | 0.174 | 0.166 | -0.462 | 1.711 | 0.614 | -1.078 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ax4_A_372 | 1ax4 | A | 381 | 387 | YLESGVR. | HHHH-EE. | aaaavxb. |
1azs_A_409 | 1azs | A | 427 | 434 | AAENHCLR | HHHHTEEE | aaaavxxx |
1bt3_A_326 | 1bt3 | A | 326 | 333 | NQKMGYKY | HHHHTEEE | aaaavbbb |
1bw0_A_361 | 1bw0 | A | 369 | 375 | LEEENVQ. | HHHH-EE. | aaaalbb. |
1cer_O_84 | 1cer | O | 84 | 91 | WAEAGVGV | HHHHTEEE | aaaavxab |
1drk_*_136 | 1drk | - | 149 | 156 | VAAHKFNV | HHHHT-EE | aaaalxxx |
1e5m_A_349 | 1e5m | A | 360 | 366 | AIAEDKV. | HHHHTEE. | aaaalbb. |
1f0l_A_310 | 1f0l | A | 311 | 317 | GSVMGIA. | HHHHTEE. | aaaavbb. |
1fvr_A_1007 | 1fvr | A | 1009 | 1015 | SLNYSVY. | HHHH-EE. | aaaalbb. |
1gde_A_332 | 1gde | A | 340 | 346 | LKEARVA. | HHHT-EE. | aaaalbx. |
1gg4_A_6 | 1gg4 | A | 10 | 17 | TDILNGEL | HHHTTEEE | aaaalbxx |
1h0c_A_332 | 1h0c | A | 340 | 346 | IDHFDIE. | HHHH-EE. | aaaavbx. |
1ipa_A_20 | 1ipa | A | 23 | 30 | RDSQRRFL | HHHHTEEE | aaaalbbx |
1j1n_A_30 | 1j1n | A | 36 | 43 | FRLTNVKL | HHHHSEEE | aaaavbbb |
1j32_A_335 | 1j32 | A | 343 | 349 | LDQHQVA. | HHHH-EE. | aaaalbx. |
1j37_A_465 | 1j37 | A | 474 | 480 | DEYSGIE. | HHHH-EE. | aaaavbb. |
1j3n_A_343 | 1j3n | A | 354 | 360 | ALYHGVI. | HHHHTEE. | aaaavbx. |
1j5u_A_26 | 1j5u | A | 38 | 45 | LEEEGIVL | HHHHT-EE | aaaalxbx |
1jce_A_184 | 1jce | A | 191 | 197 | RETYRVA. | HHHH-EE. | aaaavbx. |
1jil_A_165 | 1jil | A | 182 | 189 | NRELNCKI | HHHH-EEE | aaaalxab |
1jj2_R_12 | 1jj2 | R | 18 | 25 | MDFQNKLQ | HHHH-EEE | aaaalbbb |
1kas_*_345 | 1kas | - | 356 | 362 | ALRDQAV. | HHHHTEE. | aaaalbb. |
1khd_A_147 | 1khd | A | 154 | 161 | LDDLNVCF | HHHHSEEE | aaaavbbb |
1kob_A_359 | 1kob | A | 359 | 366 | PQEYQIYD | HHHHTEEE | aaaalbbx |
1lla_*_266 | 1lla | - | 279 | 286 | SIHLGYVI | HHHHTEEE | aaaavbbb |
1lwd_A_56 | 1lwd | A | 65 | 72 | TQKYSVAV | HHHHSEEE | aaaavbbb |
1m6i_A_187 | 1m6i | A | 187 | 194 | VTKTLRFK | HHHH-EEE | aaaavbxb |
1n16_A_308 | 1n16 | A | 312 | 319 | LKRTRLQK | HHHHTEEE | aaaavbbb |
1n8n_A_152 | 1n8n | A | 156 | 163 | LQDKNIRI | HHHTTEEE | aaaalxab |
1nns_A_286 | 1nns | A | 286 | 293 | DAKYGFVA | HHHHTEEE | aaaavxbx |
1o17_A_133 | 1o17 | A | 140 | 147 | VNKTNFVF | HHHHSEEE | aaaavbbb |
1o4s_A_325 | 1o4s | A | 333 | 339 | LEEKKVA. | HHHH-EE. | aaaalbb. |
1o8a_A_481 | 1o8a | A | 490 | 496 | LKYQGLC. | HHHH-EE. | aaaavbb. |
1opk_A_427 | 1opk | A | 429 | 435 | SLAYNKF. | HHHH-EE. | aaaavxb. |
1pot_*_42 | 1pot | - | 47 | 54 | TKETGIKV | HHHH-EEE | aaaavxxb |
1prx_A_157 | 1prx | A | 170 | 176 | TAEKRVA. | HHHH-EE. | aaaalbb. |
1qh4_A_308 | 1qh4 | A | 312 | 319 | LKRLRLQK | HHHHTEEE | aaaalbbb |
1qis_A_367 | 1qis | A | 374 | 380 | REEFGVY. | HHHH-EE. | aaaavbx. |
1v8g_A_133 | 1v8g | A | 140 | 147 | IEELGFGF | HHHHSEEE | aaaavbbb |
1vjo_A_328 | 1vjo | A | 336 | 342 | LNEHNIE. | HHHH-EE. | aaaalbx. |
1yaa_A_367 | 1yaa | A | 374 | 380 | EETHAVY. | HHHH-EE. | aaaalbx. |
2plh_*_22 | 2plh | - | 26 | 33 | AGVCRCKI | HHHHTEEE | aaaavbbb |
2reb_*_166 | 2reb | - | 182 | 189 | LKQSNTLL | HHHHT-EE | aaaavxxb |
2ts1_*_164 | 2ts1 | - | 181 | 188 | YETEGCRL | HHHH-EEE | aaaavxab |
7aat_A_367 | 7aat | A | 374 | 380 | TKEFSIY. | HHHH-EE. | aaaalbx. |
8abp_*_15 | 8abp | - | 28 | 35 | GKDLGFEV | HHHHTEEE | aaaavbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0c_A_332 | 1h0c | A | AC3GOL BINDING SITE FOR CHAIN A | R - 333 |
1h0c_A_332 | 1h0c | A | AC3GOL BINDING SITE FOR CHAIN A | S - 337 |
1h0c_A_332 | 1h0c | A | AC4GOL BINDING SITE FOR CHAIN A | F - 343 |
1o8a_A_481 | 1o8a | A | CL1CL BINDING SITE FOR CHAIN A | W - 485 |
1o8a_A_481 | 1o8a | A | CL1CL BINDING SITE FOR CHAIN A | W - 486 |
1o8a_A_481 | 1o8a | A | CL1CL BINDING SITE FOR CHAIN A | R - 489 |
Clusters included in this Subclass |
CLUSTER: HE.0.1 |
CLUSTER: HE.1.12 |
CLUSTER: HE.1.34 |