Information on SUBCLASS 2.3.1 |
Subclass Accession number: 133
Subclass: 2.3.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 57 Average sequence ID (%) : 14.4 +/- 16.6 Average RMSD (Å) : 0.565 +/- 0.213 Consensus geometry
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Consensus Sequence: | XXXpXX |
(φψ)-conformation: | aapabb |
Pattern: | [adeknrst] | x | [acfgiklmtv] | [adegknqrs] | x | x | [dehknpqrst] | x | [acfgiklmtv] | [acfilmvwy] |
Conservation: | -0.599 | -1.275 | -0.537 | 0.146 | -0.858 | 0.845 | 1.983 | -0.753 | 0.203 | 0.845 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8i_*_441 | 1a8i | - | 444 | 453 | LCIAGSHAVN | HHHHT-SEEE | aaaaababbb |
1b0u_A_213 | 1b0u | A | 215 | 224 | FARHVSSHVI | HHHHH-SEEE | aaaaaxabbb |
1b35_C_106 | 1b35 | C | 109 | 118 | KVANAFTYWR | HHHTT-SEEE | aaaaababbb |
1b9m_A_193 | 1b9m | A | 194 | 203 | AVAQNADNQL | HHHHTSSEEE | aaaaaxabbb |
1bup_A_81 | 1bup | A | 85 | 94 | SDMKHWPFMV | HHHTT-SSEE | aaaaaxaxxb |
1bx4_A_153 | 1bx4 | A | 157 | 166 | MLVEKARVCY | HHHHH-SEEE | aaaaaxabbb |
1cbf_*_38 | 1cbf | - | 42 | 51 | KLLQQADVVL | HHHHH-SEEE | aaaaapabbb |
1cbu_A_104 | 1cbu | A | 120 | 129 | AACQRCPAKV | HHHHH--SEE | aaaaaxaxxx |
1cbu_A_145 | 1cbu | A | 160 | 169 | RLAAAADEVW | HHHHH-SEEE | aaaaaxabbb |
1cg2_A_183 | 1cg2 | A | 188 | 197 | EEAKLADYVL | HHHHH-SEEE | aaaaaxabbb |
1cnz_A_59 | 1cnz | A | 63 | 72 | EGCEQADAIL | HHHHTSSEEE | aaaaababbx |
1cr1_A_490 | 1cr1 | A | 491 | 500 | ALRQLSDTII | HHHHH-SEEE | aaaaaxabbb |
1d2n_A_586 | 1d2n | A | 598 | 607 | DDAYKSQLSC | HHHHTSSEEE | aaaaababbb |
1di6_A_84 | 1di6 | A | 87 | 95 | ATLAVADRE. | HHHHT-SEE. | aaaaaxabx. |
1dlj_A_367 | 1dlj | A | 369 | 378 | NFKKQANIIV | HHHHH-SEEE | aaaaaxabbb |
1dlj_A_67 | 1dlj | A | 69 | 78 | AAYKEAELVI | HHHHH-SEEE | aaaaaxabbb |
1dqn_A_109 | 1dqn | A | 113 | 122 | KQLKEKREVV | HHHHH-SSEE | aaaaaxabbb |
1f0k_A_133 | 1f0k | A | 137 | 146 | WLAKIATKVM | HHTTT-SEEE | aaaaaxabbb |
1f5n_A_112 | 1f5n | A | 118 | 127 | LAVLLSSTFV | HHHHH-SEEE | aaaaaxabbb |
1g5t_A_165 | 1g5t | A | 166 | 175 | DILDLADTVS | HHHHH-SEEE | aaaaaxabbb |
1gpj_A_221 | 1gpj | A | 223 | 232 | DHLARSDVVV | HHHHT-SEEE | aaaaababbb |
1gv8_A_151 | 1gv8 | A | 154 | 163 | AVAKFFSASC | HHHTTSSEEE | aaaaaxabbb |
1icr_A_72 | 1icr | A | 73 | 82 | RKMLDASHVV | HHHHHSSEEE | aaaaaxabbb |
1izo_A_105 | 1izo | A | 124 | 133 | TRWEKADEVV | HHHTTSSEEE | aaaaaxabbb |
1jf8_A_69 | 1jf8 | A | 70 | 79 | DILKQSDLVV | HHHHH-SEEE | aaaaaxabbb |
1jjf_A_213 | 1jjf | A | 214 | 223 | AAREKLKLLF | HHHHH-SEEE | aaaaaxabbb |
1jlj_A_96 | 1jlj | A | 99 | 107 | ATKEVIERE. | HHHHH-SEE. | aaaaaxabx. |
1jnd_A_207 | 1jnd | A | 209 | 218 | ALNGLVDFVN | HHHTT-SEEE | aaaaababbb |
1jw9_B_112 | 1jw9 | B | 117 | 126 | ALIAEHDLVL | HHHHTSSEEE | aaaaababbb |
1kfs_A_336 | 1kfs | A | 344 | 353 | AKLEKAPVFA | HHHHHSSSEE | aaaaaxabbx |
1ks9_A_58 | 1ks9 | A | 59 | 68 | DFLATSDLLL | HHHHT-SEEE | aaaaaxabbb |
1l3i_A_46 | 1l3i | A | 50 | 59 | ELAGRVRRVY | HHHTTSSEEE | aaaaababbb |
1m3s_A_118 | 1m3s | A | 118 | 127 | SIGKQADLII | HHHHH-SEEE | aaaaaxabbb |
1mdw_A_328 | 1mdw | A | 330 | 339 | DFLRHYSRLE | HHHHH--EEE | aaaaaxabbb |
1moq_*_380 | 1moq | - | 380 | 389 | SLVRESDLAL | HHHHHSSEEE | aaaaaxabbb |
1mv8_A_384 | 1mv8 | A | 386 | 395 | EVVASSDVLV | HHHHH-SEEE | aaaaababbb |
1mv8_A_70 | 1mv8 | A | 72 | 81 | KAVLDSDVSF | HHHHT-SEEE | aaaaababbx |
1nm8_A_249 | 1nm8 | A | 256 | 265 | RSIQKSIFTV | HHHHHSS-EE | aaaaapabbb |
1np3_A_66 | 1np3 | A | 68 | 77 | TAVAAADVVM | HHHHT-SEEE | aaaaababbx |
1nw3_A_226 | 1nw3 | A | 230 | 239 | ERIANTSVIF | HHHHH-SEEE | aaaaaxabbb |
1nye_D_746 | 1nye | D | 746 | 755 | PVSQVLKAEI | HHHHH--SEE | aaaaaxaxxb |
1psw_A_252 | 1psw | A | 257 | 266 | ILIAACKAIV | HHHHTSS-EE | aaaaaxabbb |
1psz_A_73 | 1psz | A | 77 | 86 | KKTSEADLIF | HHHHH-SEEE | aaaaaxabbb |
1q7e_A_87 | 1q7e | A | 87 | 96 | KLIREADILV | HHHHH-SEEE | aaaaaxabbb |
1qmg_A_186 | 1qmg | A | 188 | 197 | ETISGSDLVL | HHHHT-SEEE | aaaaaxabbb |
1r0w_A_607 | 1r0w | A | 608 | 617 | EHLRKADKIL | HHHHT-SEEE | aaaaaxabbb |
1r6l_A_178 | 1r6l | A | 179 | 188 | LEDSAAETDL | HHHHH-SEEE | aaaaaxabbb |
1rkd_*_129 | 1rkd | - | 130 | 139 | ERIANASALL | HHHHH-SEEE | aaaaaxabbb |
1toa_A_74 | 1toa | A | 78 | 87 | EWLGNADLIL | HHHHH-SEEE | aaaaaxabbb |
1uqt_A_341 | 1uqt | A | 346 | 355 | KIFRYSDVGL | HHHHH-SEEE | aaaaaxabbb |
1uu1_A_85 | 1uu1 | A | 91 | 100 | VMMLMFDRSV | HHHHHSSEEE | aaaaababbb |
1v4v_A_136 | 1v4v | A | 142 | 151 | LTDVLTDLDF | HHHHH-SEEE | aaaaaxabbb |
1vfr_A_75 | 1vfr | A | 75 | 84 | PHIKACSHVI | HHHHHSSEEE | aaaaaxabbb |
1vhv_A_17 | 1vhv | A | 21 | 30 | EAVREADEVY | HHHHH-SEEE | aaaaaxabbb |
1vim_A_116 | 1vim | A | 116 | 125 | SLAKMADVVM | HHHHH-SEEE | aaaaaxabbx |
1vim_A_21 | 1vim | A | 29 | 38 | KLIDSARSIF | HHHHHSS-EE | aaaaaxabbb |
1vrt_A_516 | 1vrt | A | 523 | 532 | EQLIKKEKVY | HHHHH-SEEE | aaaaaxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1kfs_A_336 | 1kfs | A | EXOEXONUCLEASE ACTIVE SITE. | D - 355 |
1kfs_A_336 | 1kfs | A | EXOEXONUCLEASE ACTIVE SITE. | E - 357 |
1uu1_A_85 | 1uu1 | A | AC1PMP BINDING SITE FOR CHAIN A | A - 85 |
1uu1_A_85 | 1uu1 | A | AC1PMP BINDING SITE FOR CHAIN A | D - 86 |
Clusters included in this Subclass |
CLUSTER: HE.1.2 |
CLUSTER: HE.2.6 |
CLUSTER: HE.3.63 |
CLUSTER: HE.3.8 |
CLUSTER: HE.4.110 |
CLUSTER: HE.4.58 |
CLUSTER: HE.5.60 |