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Information on SUBCLASS 1.1.3
Subclass Accession number: 7019
Subclass: 1.1.3 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 64

Average sequence ID (%) : 8.8 +/- 13.0
Average RMSD (Å) : 0.447 +/- 0.185

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: XhXXX
(φψ)-conformation: bbpaa
Pattern: xx[acfgilmpvwy]xx[adegknqrst]x[acfgilmvwy]
Conservation:-1.000-0.5010.9700.589-1.7131.043-0.6200.232
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ao5_A_1561ao5   A161168TLLPNENCEEE-HHHHbxbxaaaa
1ati_A_321ati   A3239YDYGPLGVEEE-HHHHbbxxaaaa
1aui_A_2581aui   A258265YFYSYPAVEEE-HHHHbbbbaaaa
1cbg_*_4741cbg   -475482RHPKLSAHEEE-HHHHxbpxaaaa
1coz_A_301coz   A3441AISTDEFNEEE-HHHHxbpxaaaa
1cpo_*_1471cpo   -147153.HFDYADM.EE-HHHH.bbbaaaa
1ctt_*_321ctt   -3238.LLTGEQV.EE-HHHH.bbxaaaa
1dbt_A_311dbt   A3239VKVGMELFEEE-HHHHbbbbaaaa
1dcs_*_2221dcs   -224231VFCGAIATEEE-HHHHbbxbaaaa
1djx_A_2691djx   A269275.QMTKDGF.EE-HHHH.bbxaaaa
1dqu_A_941dqu   A94101VYVSGWQSEEE-HHHHbbbxaaaa
1dzf_A_871dzf   A8793.SVGVKTM.EE-HHHH.bxxaaaa
1e4m_M_4821e4m   M486493RDLKKSGQEEE-HHHHbbpxaaaa
1evl_A_2651evl   A265271.FWHNDGW.EE-HHHH.bxxaaaa
1f4l_A_3701f4l   A370377IDLNLEDFEEE-HHHHbbxxaaaa
1f8m_A_881f8m   A8895IYLSGWQVEEE-HHHHbbbxaaaa
1g5h_D_4131g5h   D415422VLVTETTLEEE-HHHHbbbbaaaa
1gow_A_4521gow   A453460LYWRPSALEEE-HHHHbbxxaaaa
1gsa_*_2411gsa   -245252RPLTESDWEE--HHHHbpxxaaaa
1gyn_A_561gyn   A5865VQFSNGGAEEE-HHHHxbbxaaaa
1gyt_A_2181gyt   A221228RVIGEQQMEEE-HHHHbbxxaaaa
1h49_A_4851h49   A486493RYMKESAKEEE-HHHHxbpxaaaa
1htr_B_3011htr   B302309WILGDVFLEEE-HHHHbbxbaaaa
1i50_B_4041i50   B405412RLDLAGPLEEE-HHHHbbxbaaaa
1iw7_C_3311iw7   C332339RIRTVGELEEE-HHHHxxxxaaaa
1j79_A_1941j79   A196203ATITPQHLEEE-HHHHbbbxaaaa
1jk7_A_2251jk7   A225232FTFGAEVVEEE-HHHHbbbbaaaa
1jp4_A_451jp4   A4552DLQTKADREEE-HHHHbbbbaaaa
1jr1_A_2171jr1   A220227AIIARTDLEEE-HHHHbbbxaaaa
1k2y_X_2571k2y   X257263.IIYPDRL.EE-HHHH.xbxaaaa
1k46_A_671k46   A6773.VLTQEDT.EE-HHHH.xbxaaaa
1ko7_A_501ko7   A5158QLLGTTELEEE-HHHHbbbbaaaa
1kyz_A_1021kyz   A106113YGLATVAKEEE-HHHHbbxxaaaa
1l5h_A_1481l5h   A150157VQSECPIGEEE-HHHHbxxxaaaa
1lam_*_1981lam   -201208FIRPKSWIEEE-HHHHbxxxaaaa
1ltm_*_3231ltm   -326333WYGLPNFYEEE-HHHHbxxxaaaa
1ly1_A_291ly1   A3037YNINRDDYEEE-HHHHbxbbaaaa
1m6b_A_3421m6b   A342349LDFLITGLEEE-HHHHbbbxaaaa
1mxr_A_1801mxr   A182189VTVSLRELEEE-HHHHbxbbaaaa
1n40_A_3041n40   A305312VLVLLEGAEEE-HHHHbbxxaaaa
1n8y_C_3531n8y   C353360LAFLPESFEEE-HHHHbbbbaaaa
1nj1_A_451nj1   A4551.VWMPHGF.EE-HHHH.bxxaaaa
1nyr_A_2601nyr   A264271PLWLPNGAEEE-HHHHxxxxaaaa
1od0_A_4251od0   A426433RIVKDSGYEEE-HHHHxbpxaaaa
1od4_A_19231od4   A19231929.VWHPNSA.EE-HHHH.bxbaaaa
1ogs_A_4101ogs   A411418FYKQPMFYEEE-HHHHbbxxaaaa
1orf_A_2261orf   A229236ILLSKKHLEE--HHHHxxxxaaaa
1php_*_1651php   -165172AVAGFLMEEEE-HHHHbbxxaaaa
1pix_A_3851pix   A385391.KLYRQGL.EE-HHHH.xbbaaaa
1pkg_A_8451pkg   A845851.VYTFESD.EE-HHHH.bbbaaaa
1pym_A_431pym   A4350IWGSGLSVEEE-HHHHbbxxaaaa
1q16_A_5361q16   A538545IIVGAGLNEEE-HHHHbxbbaaaa
1qap_A_1821qap   A182189FLIKENHIEEE-HHHHxbxbaaaa
1qox_A_4291qox   A430437RTPKDSFYEEE-HHHHbbxxaaaa
1qpo_A_1691qpo   A169176ALIKDNHVEEE-HHHHxbxbaaaa
1rhs_*_1611rhs   -161167.LKTYEQV.EE-HHHH.bbxaaaa
1ryp_A_2321ryp   A234241FTLSAENIEE--HHHHbbxxaaaa
1sft_A_3381sft   A338345EVISIDDVEEE-HHHHxbbbaaaa
1ubk_L_4921ubk   L497504QLVVPSTWEEE-HHHHbbbbaaaa
1v39_*_2211v39   -222229TRVTKSDAEEE-HHHHbxbbaaaa
2fok_A_2642fok   A265272FKITGEGLEEE-HHHHbbpbaaaa
2hlc_A_1562hlc   A161168LVIDNDRCEEE-HHHHxxbxaaaa
3pvi_A_1083pvi   A113120YRLEPKDLEEE-HHHHbbbxaaaa
4fiv_*_1014fiv   -101107.LLGRDNM.EE-HHHH.bxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cpo_*_1471cpo   *     MANALPHA-D-MANNOSE D - 149
1cpo_*_1471cpo   *     MANALPHA-D-MANNOSE Y - 150
1cpo_*_1471cpo   *     MANALPHA-D-MANNOSE A - 151
1cpo_*_1471cpo   *     MANALPHA-D-MANNOSE D - 152
1cpo_*_1471cpo   *     MANALPHA-D-MANNOSE E - 155
1cpo_*_1471cpo   *     MANALPHA-D-MANNOSE I - 156
1cpo_*_1471cpo   *     MANALPHA-D-MANNOSE Q - 159
1cpo_*_1471cpo   *     MANALPHA-D-MANNOSE S - 162
1dbt_A_311dbt   A     U5PURIDINE-5'-MONOPHOSPHATE K - 33
1dbt_A_311dbt   A     U5PURIDINE-5'-MONOPHOSPHATE G - 35
1e4m_M_4821e4m   M     NAGN-ACETYL-D-GLUCOSAMINE N - 482
1e4m_M_4821e4m   M     NAGN-ACETYL-D-GLUCOSAMINE T - 484
1e4m_M_4821e4m   M     NAGN-ACETYL-D-GLUCOSAMINE D - 485
1e4m_M_4821e4m   M     NAGN-ACETYL-D-GLUCOSAMINE I - 499
1f8m_A_881f8m   A     MGMAGNESIUM ION Y - 89
1f8m_A_881f8m   A     PYRPYRUVIC ACID Y - 89
1f8m_A_881f8m   A     MGMAGNESIUM ION S - 91
1f8m_A_881f8m   A     PYRPYRUVIC ACID S - 91
1f8m_A_881f8m   A     MGMAGNESIUM ION G - 92
1f8m_A_881f8m   A     MGMAGNESIUM ION W - 93
1f8m_A_881f8m   A     PYRPYRUVIC ACID W - 93
1g5h_D_4131g5h   D     MSESELENOMETHIONINE T - 420
1iw7_C_3311iw7   C     MGMAGNESIUM ION R - 331
1jp4_A_451jp4   A     PO4PHOSPHATE ION D - 45
1jp4_A_451jp4   A     MGMAGNESIUM ION D - 45
1jp4_A_451jp4   A     AMPADENOSINE MONOPHOSPHATE D - 45
1jp4_A_451jp4   A     PO4PHOSPHATE ION L - 46
1jp4_A_451jp4   A     MGMAGNESIUM ION L - 46
1jp4_A_451jp4   A     PO4PHOSPHATE ION D - 51
1jp4_A_451jp4   A     MGMAGNESIUM ION D - 51
1ko7_A_501ko7   A     PO4PHOSPHATE ION G - 54
1ko7_A_501ko7   A     PO4PHOSPHATE ION T - 55
1ko7_A_501ko7   A     PO4PHOSPHATE ION T - 56
1ko7_A_501ko7   A     PO4PHOSPHATE ION E - 57
1l5h_A_1481l5h   A     CLFFE(8)-S(7) CLUSTER S - 152
1l5h_A_1481l5h   A     CLFFE(8)-S(7) CLUSTER E - 153
1l5h_A_1481l5h   A     CLFFE(8)-S(7) CLUSTER C - 154
1l5h_A_1481l5h   A     CLFFE(8)-S(7) CLUSTER P - 155
1mxr_A_1801mxr   A     HGMERCURY (II) ION Y - 194
1mxr_A_1801mxr   A     HGMERCURY (II) ION L - 195
1mxr_A_1801mxr   A     HGMERCURY (II) ION C - 196
1mxr_A_1801mxr   A     HGMERCURY (II) ION L - 197
1mxr_A_1801mxr   A     HGMERCURY (II) ION M - 198
1mxr_A_1801mxr   A     HGMERCURY (II) ION S - 199
1mxr_A_1801mxr   A     HGMERCURY (II) ION V - 200
1mxr_A_1801mxr   A     FEFE (III) ION L - 203
1mxr_A_1801mxr   A     FEFE (III) ION E - 204
1n40_A_3041n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 309
1od4_A_19231od4   A     MSESELENOMETHIONINE P - 1926
1od4_A_19231od4   A     MSESELENOMETHIONINE T - 1932
1od4_A_19231od4   A     MSESELENOMETHIONINE A - 1935
1od4_A_19231od4   A     MSESELENOMETHIONINE I - 1936
1od4_A_19231od4   A     MSESELENOMETHIONINE N - 1937
1od4_A_19231od4   A     MSESELENOMETHIONINE F - 1939
1orf_A_2261orf   A     MAIDEOXO-METHYLARGININE G - 226
1orf_A_2261orf   A     MAIDEOXO-METHYLARGININE V - 227
1orf_A_2261orf   A     MAIDEOXO-METHYLARGININE Y - 228
1pym_A_431pym   A     MSESELENOMETHIONINE I - 43
1pym_A_431pym   A     MSESELENOMETHIONINE W - 44
1pym_A_431pym   A     OXLOXALATE ION W - 44
1pym_A_431pym   A     MGMAGNESIUM ION W - 44
1pym_A_431pym   A     MSESELENOMETHIONINE G - 45
1pym_A_431pym   A     OXLOXALATE ION G - 45
1pym_A_431pym   A     MSESELENOMETHIONINE S - 46
1pym_A_431pym   A     OXLOXALATE ION S - 46
1pym_A_431pym   A     MGMAGNESIUM ION S - 46
1pym_A_431pym   A     OXLOXALATE ION G - 47
1pym_A_431pym   A     MGMAGNESIUM ION G - 47
1pym_A_431pym   A     OXLOXALATE ION L - 48
1pym_A_431pym   A     MGMAGNESIUM ION L - 48
1pym_A_431pym   A     OXLOXALATE ION S - 49
1pym_A_431pym   A     MSESELENOMETHIONINE V - 50
1qap_A_1821qap   A     NTMQUINOLINIC ACID L - 183
1ubk_L_4921ubk   L     MGMAGNESIUM ION Q - 497
1ubk_L_4921ubk   L     MGMAGNESIUM ION L - 498
1ubk_L_4921ubk   L     MGMAGNESIUM ION V - 499
1ubk_L_4921ubk   L     MGMAGNESIUM ION V - 500
1ubk_L_4921ubk   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) V - 500
1ubk_L_4921ubk   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) P - 501
1ubk_L_4921ubk   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) S - 502
1ubk_L_4921ubk   L     MGMAGNESIUM ION T - 503
1ubk_L_4921ubk   L     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) T - 503
1v39_*_2211v39   *     MDG7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE E - 233
1v39_*_2211v39   *     MDG7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE Y - 237
1v39_*_2211v39   *     MDG7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE N - 240
4fiv_*_1014fiv   *     1NI4-[2-(2-ACETYLAMINO-3-NAPHTHALEN-1-YL-PROPIONYLAMINO)-3-METHYL-BUTYRYLAMINO]-3-HYDROXY-6-METHYL-HEPTANOIC ACID [1-(1-CARBAMOYL-2-NAPHTHALEN-1-YL-ETHYLCARBAMOYL) -PROPYL]-AMIDE L - 101
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1pym_A_431pym   A PEPCATALYTIC SITEG - 47
1pym_A_431pym   A PEPCATALYTIC SITEL - 48

Clusters included in this Subclass
CLUSTER: EH.0.1
CLUSTER: EH.1.2
CLUSTER: EH.2.2