Information on SUBCLASS 3.4.1 |
Subclass Accession number: 5487
Subclass: 3.4.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 64 Average sequence ID (%) : 11.8 +/- 13.9 Average RMSD (Å) : 0.816 +/- 0.211 Consensus geometry
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Consensus Sequence: | XXXXphX |
(φψ)-conformation: | aabaabb |
Pattern: | x | x | [afiklmv] | x | [adeknqrst] | x | [deknpqrst] | [adegknqrst] | [acfgiklmtv] | x | [acfgilmptv] | x |
Conservation: | -0.290 | -1.586 | 0.813 | -0.251 | 0.296 | -1.055 | 1.549 | 0.615 | 1.590 | -0.953 | -0.388 | -0.340 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a04_A_16 | 1a04 | A | 24 | 35 | QLISMAPDITVV | HHHTT-TTEEEE | aaaaabaabbxa |
1a8l_*_38 | 1a8l | - | 47 | 58 | ELSELTDKLSYE | HHHTT-TTEEEE | aaaaabaabbbb |
1aiu_*_33 | 1aiu | - | 44 | 55 | SLSEKYSNVIFL | HHHHH-TTEEEE | aaaaabaabbbb |
1amf_*_171 | 1amf | - | 172 | 183 | SDAVASKGVKVV | HHHHH-SSEEEE | aaaaaxaabbxa |
1c7k_A_15 | 1c7k | A | 24 | 35 | IWNSSVRNVQLR | HHHHH-SSEEEE | aaaaabaabbbb |
1chu_A_145 | 1chu | A | 146 | 157 | SKALNHPNIRVL | HHHHH-TTEEEE | aaaaaxaabbbx |
1cqx_A_309 | 1cqx | A | 316 | 327 | EAAKTYENLDLF | HHHHH-TTEEEE | aaaaaxaabbbb |
1din_*_176 | 1din | - | 184 | 195 | EGFGANPLLQVH | HHHTT-TTEEEE | aaaaabaaxbbb |
1dnp_A_107 | 1dnp | A | 115 | 126 | EVERALRNVVCE | HHHHH-TTSEEE | aaaaaxaabxbb |
1dpe_*_245 | 1dpe | - | 246 | 257 | ARMKQDKSINLM | HHHHH-TTEEEE | aaaaaxaabxxx |
1e5e_A_319 | 1e5e | A | 325 | 335 | KLLDNLKLITL. | HHHHT-SSSEE. | aaaaaxaaxxx. |
1e6u_A_14 | 1e6u | A | 21 | 32 | RQLEQRGDVELV | HHHTT-TTEEEE | aaaaabaabbxb |
1e8c_A_243 | 1e8c | A | 247 | 258 | RWLAKLPDAVAV | HHHTT-TT-EEE | aaaaabaaxbxb |
1elu_A_298 | 1elu | A | 314 | 324 | RGLNQLPHVHC. | HHHHHSTTEEE. | aaaaaxaabbx. |
1euc_A_109 | 1euc | A | 117 | 128 | HRLLRQGKTRLI | HHHTT-SS-EEE | aaaaabaabxbb |
1f6d_A_18 | 1f6d | A | 21 | 32 | HALAKDPFFEAK | HHHHH-TT--EE | aaaaaxaabbbb |
1f9m_A_47 | 1f9m | A | 58 | 69 | KLAEEYLDVIFL | HHHHH-TTSEEE | aaaaabaabxbb |
1feh_A_211 | 1feh | A | 215 | 226 | KNALNAPEKHVI | HHHHH-TT-EEE | aaaaaxaaxxxx |
1fo8_A_220 | 1fo8 | A | 229 | 240 | PLLKADPSLWCV | HHHHH-TTEEEE | aaaaabaababb |
1g5t_A_98 | 1g5t | A | 113 | 124 | KRMLADPLLDMV | HHHTT-TT-SEE | aaaaaxaaxabb |
1gc0_A_321 | 1gc0 | A | 327 | 337 | RFMNALQLFSR. | HHHHH-SSSEE. | aaaaapaaxxx. |
1gd1_O_10 | 1gd1 | O | 17 | 28 | RAALKNPDIEVV | HHHTT-SSEEEE | aaaaabaabbxa |
1gh2_A_35 | 1gh2 | A | 46 | 57 | SMSNKYPQAVFL | HHHHH-TTSEEE | aaaaabaabbbb |
1gpu_A_504 | 1gpu | A | 512 | 523 | KNSLESKHTPSI | HHHHH-SS--EE | aaaaaxaabwbb |
1gud_A_146 | 1gud | A | 157 | 168 | EAFKKASQIKLV | HHHHT-TTEEEE | aaaaabaaxbxa |
1hrd_A_352 | 1hrd | A | 356 | 367 | RFLMQQPNMVVA | HHHHH-TT-EEE | aaaaaxaabbbb |
1hyu_A_132 | 1hyu | A | 141 | 152 | LMAVLNPRIKHT | HHHHH-TTEEEE | aaaaabaabbbb |
1ii2_A_11 | 1ii2 | A | 17 | 27 | WALKIEKDSRL. | HHHHH-TT-EE. | aaaaaxaaxbb. |
1ik6_A_10 | 1ik6 | A | 20 | 31 | EEMERDERVVVL | HHHHH-TTEEEE | aaaaabaaxbbb |
1itw_A_65 | 1itw | A | 70 | 81 | GKLATTPDANII | HHHTTSTT-EEE | aaaaabaapbbb |
1iu8_A_18 | 1iu8 | A | 25 | 36 | ALSERIPEVVGE | HHHHH-TTEEEE | aaaaabaaxbbb |
1j1i_A_238 | 1j1i | A | 243 | 254 | KFLDLIDDSWGY | HHHHH-TTEEEE | aaaaaxaabbbb |
1j3l_A_5 | 1j3l | A | 7 | 18 | DLSDLYPEGEAL | HHHHH-TTSEEE | aaaaabaaxbbb |
1jlr_A_22 | 1jlr | A | 28 | 38 | DIITRFPNVVL. | HHHHH-TTEEE. | aaaaabaaxbx. |
1jyh_A_107 | 1jyh | A | 115 | 125 | NSLLQDSAYEM. | HHHTT-SSEEE. | aaaaaxaabbx. |
1jz7_A_549 | 1jz7 | A | 554 | 565 | QAFRQYPRLQGG | HHHHH-TTEEEE | aaaaabaaxaee |
1k4k_A_53 | 1k4k | A | 62 | 72 | LAIADKPLFTL. | HHHTT-TTEEE. | aaaaabaabbb. |
1kam_A_53 | 1kam | A | 62 | 72 | LAIQSNPSFKL. | HHHTT-TTEEE. | aaaaabaaxbb. |
1kng_A_93 | 1kng | A | 103 | 114 | TELGKDKRFQLV | HHHTT-TTSEEE | aaaaaxaabbbb |
1l8a_A_645 | 1l8a | A | 647 | 658 | IQSLTIPNCISY | HHHTTSTTEEEE | aaaaaxaabbbb |
1lu4_A_1037 | 1lu4 | A | 1048 | 1059 | QVAAANPAVTFV | HHHHH-TTSEEE | aaaaabaabxxb |
1mpx_A_146 | 1mpx | A | 156 | 167 | WLVKNVSESNGK | HHHHH-TTEEEE | aaaaabaaxavb |
1mqi_A_124 | 1mqi | A | 125 | 136 | EDLSKQTEIAYG | HHHHT-SSSEEE | aaaaabaaxxbb |
1ni4_B_15 | 1ni4 | B | 15 | 26 | EELERDEKVFLL | HHHHH-TTEEEE | aaaaabaaxbbb |
1nrw_A_179 | 1nrw | A | 187 | 198 | KRYEHAEDLTLV | HHHTT-TTEEEE | aaaaaxaabbbb |
1oaa_*_169 | 1oaa | - | 184 | 195 | VLAAEEPSVRVL | HHHHH-TTEEEE | aaaaabaabxbb |
1oi2_A_21 | 1oi2 | A | 28 | 39 | GLAKAHPSLTLH | HHHHH-TTEEEE | aaaaabaabbxx |
1ovn_A_57 | 1ovn | A | 68 | 79 | SAHKATKDLLIA | HHHHH-SSEEEE | aaaaabaabxbb |
1p99_A_95 | 1p99 | A | 100 | 111 | QYKKAHKGTKIS | HHHHH-TT--EE | aaaaabaabbbb |
1pb7_A_225 | 1pb7 | A | 230 | 240 | FEASQKCDLVT. | HHHHH-TTEEE. | aaaaabaabbb. |
1php_*_329 | 1php | - | 336 | 347 | EALAEALDTYSV | HHHHH-TT-EEE | aaaaaxaabxbb |
1pn0_A_17 | 1pn0 | A | 28 | 39 | EYVRQKPDLKVR | HHHHHSTT--EE | aaaaabaaxbbb |
1q0r_A_255 | 1q0r | A | 258 | 269 | HLAGLIPTARLA | HHHHTSTTEEEE | aaaaabaaxbbb |
1qna_A_40 | 1qna | A | 42 | 52 | AIALQARNAEY. | HHHHH-SSEEE. | aaaaaxaabbb. |
1r51_A_227 | 1r51 | A | 237 | 248 | QILARQQLIETV | HHHHH-TTEEEE | aaaaabaaxabb |
1r51_A_76 | 1r51 | A | 86 | 97 | HFIEKYNHIHAA | HHHHH-TTEEEE | aaaaabaaxabb |
1s1q_A_18 | 1s1q | A | 27 | 37 | NVITLYKDLKP. | HHHHH-TTEEE. | aaaaabaabbx. |
1s29_A_63 | 1s29 | A | 68 | 77 | EAIRPSEKLV.. | HHHTT-SSEE.. | aaaaapaabb.. |
1s2d_A_19 | 1s2d | A | 30 | 41 | ELLAKNPSIAHV | HHHTT-TTEEEE | aaaaaxaababb |
1s4q_A_122 | 1s4q | A | 127 | 138 | AIKKTMPEAVTV | HHHHH-TTSEEE | aaaaabaaxxxb |
1umd_B_6 | 1umd | B | 16 | 27 | EEMAKDPRVVVL | HHHHH-TTEEEE | aaaaabaaxbbb |
2bce_*_394 | 2bce | - | 403 | 414 | QHKSHAKSANTY | HHHHH-SS--EE | aaaaapaabxbb |
2dap_*_13 | 2dap | - | 20 | 31 | KLIAKQPDMDLV | HHHTT-TTEEEE | aaaaaxaabbxa |
2gbp_*_15 | 2gbp | - | 26 | 37 | QDAKAAPDVQLL | HHHTT-TTEEEE | aaaaabaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e6u_A_14 | 1e6u | A | AC1NAP BINDING SITE FOR CHAIN A | M - 14 |
1gud_A_146 | 1gud | A | ZN2ZN BINDING SITE FOR CHAIN A | E - 157 |
1oi2_A_21 | 1oi2 | A | AC3SO4 BINDING SITE FOR CHAIN A | A - 32 |
1oi2_A_21 | 1oi2 | A | AC3SO4 BINDING SITE FOR CHAIN A | H - 33 |
1oi2_A_21 | 1oi2 | A | AC3SO4 BINDING SITE FOR CHAIN A | P - 34 |
1oi2_A_21 | 1oi2 | A | AC3SO4 BINDING SITE FOR CHAIN A | S - 35 |
Clusters included in this Subclass |
CLUSTER: HE.2.25 |
CLUSTER: HE.3.206 |
CLUSTER: HE.3.255 |
CLUSTER: HE.3.29 |
CLUSTER: HE.4.17 |
CLUSTER: HE.4.65 |
CLUSTER: HE.5.30 |
CLUSTER: HE.5.72 |
CLUSTER: HE.6.9 |
CLUSTER: HE.7.47 |