Information on SUBCLASS 4.2.1 |
Subclass Accession number: 7885
Subclass: 4.2.1 ![]() Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 127 Average sequence ID (%) : 15.5 +/- 15.9 Average RMSD (Å) : 0.437 +/- 0.154 Consensus geometry
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Consensus Sequence: | XXXpGpXX |
(φψ)-conformation: | bbaagpbb |
Pattern: | x | [acfgilmvwy] | x | x | x | [cdehknqrstwy] | [adgkns] | [cdehknqrstwy] | x | x | x |
Conservation: | -0.695 | -0.232 | -0.544 | -0.272 | -0.321 | 0.851 | 2.671 | 0.269 | -0.442 | -0.508 | -0.778 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a2p_A_87 | 1a2p | A | 88 | 98 | ILYSSDWLIYK | EEEETT--EEE | bbbxaavxbbb |
1abr_A_212 | 1abr | A | 218 | 228 | TLTNIRNEPVI | EEE-TTS-EEE | xbbxaavbpbx |
1aog_A_267 | 1aog | A | 268 | 278 | SVTFESGKKMD | EEEETTS-EEE | bbbxaavxbbb |
1apy_B_279 | 1apy | B | 282 | 292 | ICANVTGSYGA | EEEETTS-EEE | bbbxaagxbbb |
1avq_A_120 | 1avq | A | 120 | 129 | .GLCSDGNGLE | .EEETTS-EEE | .ebxaavxxbb |
1b37_A_247 | 1b37 | A | 248 | 258 | TVKTEDNSVYS | EEEETTS-EEE | bbbbaavxbbb |
1bqg_*_41 | 1bqg | - | 48 | 58 | ILTDSSGHVGV | EEEETTS-EEE | bbbbaavxbbb |
1bu6_O_15 | 1bu6 | O | 19 | 29 | VVMDHDANIIS | EEE-TTS-EEE | bbbxaavbxab |
1buc_A_143 | 1buc | A | 144 | 154 | ATKNDDGTYTL | EEE-TTS-EEE | bxxbaavbbbx |
1c8u_A_258 | 1c8u | A | 264 | 274 | EFYTQDGVLVA | EEEETT--EEE | bbbxaavxxab |
1ca1_*_275 | 1ca1 | - | 279 | 289 | GIKTKDGKTQE | EEEETTS-EEE | bbbxaavxbbb |
1cb8_A_215 | 1cb8 | A | 215 | 223 | .GLQYDYSYL. | .EEETTS-EE. | .exxaavxbb. |
1cl8_A_94 | 1cl8 | A | 96 | 106 | EVKDDYGEWRV | EEE-TTS-EEE | bbxxaavxxbx |
1clc_*_77 | 1clc | - | 79 | 89 | YVVKEDGTIVY | EEEETTSBEEE | bxbxaagxxab |
1cpy_*_69 | 1cpy | - | 69 | 79 | SSIGPDLKPIG | EEEETTTEEEE | bbbbaalbpbp |
1ctt_*_211 | 1ctt | - | 214 | 224 | ALECKDGRIFS | EEEETTS-EEE | bbbxaavxbbb |
1ctt_*_74 | 1ctt | - | 76 | 86 | IARGVSGTWYF | EEEETTS-EEE | bxbxaagxbbx |
1d06_A_149 | 1d06 | A | 151 | 161 | VVSATDGTIVS | EEEETTSBEEE | bbbxaavxxab |
1d7u_A_36 | 1d7u | A | 36 | 46 | FVYDADGRAIL | EEEETT--EEE | bbbxaavxxbx |
1dym_A_266 | 1dym | A | 272 | 282 | FLANRRGKLEK | EEE-TTS-EEE | bxbxaavbpab |
1e25_A_240 | 1e25 | A | 249 | 259 | IILLPDGRPLL | EEE-TTS-EEE | bbxxaavxxbx |
1e39_A_276 | 1e39 | A | 281 | 291 | VLKDDKGTVKG | EEE-TTS-EEE | xxbxaavbxae |
1e8g_A_197 | 1e8g | A | 201 | 211 | EVVLANGELLR | EEEETTS-EEE | bbxxaavxxbb |
1ec7_A_35 | 1ec7 | A | 42 | 52 | IIKDNSGHTGV | EEEETTS-EEE | bbbbaavbbbb |
1eem_A_74 | 1eem | A | 74 | 84 | VLENSQGQLIY | EEEETT--EEE | bbbbaavxbbb |
1eg7_A_1258 | 1eg7 | A | 1259 | 1269 | LVQTLENTPAF | EEEETT--EEE | xbbxaavxwbb |
1en2_A_17 | 1en2 | A | 17 | 25 | .CCSIWGWCG. | .EEETTS-EE. | .xbxaavbxb. |
1en2_A_63 | 1en2 | A | 63 | 71 | .CCSVHGWCG. | .EEETTSBEE. | .bxxaavbxe. |
1ep5_A_250 | 1ep5 | A | 256 | 266 | VMWNEKGVTVK | EEE-TT--EEE | bbbxaavxxbb |
1eth_A_414 | 1eth | A | 420 | 430 | TVERNDGKVYD | EEEETTS-EEE | bbbpaagpbbb |
1evl_A_605 | 1evl | A | 607 | 617 | AVRTRRGKDLG | EEEETTS-EEE | xxbbaavxbae |
1f3z_*_76 | 1f3z | - | 78 | 88 | SIESDSGVELF | EEEETTS-EEE | bbbxaagbbbb |
1f52_A_16 | 1f52 | A | 20 | 30 | RFTDTKGKEQH | EEE-TTS-EEE | bbbxaagxxbb |
1f89_A_109 | 1f89 | A | 114 | 124 | IIFNEDGKLID | EEE-TTS-EEE | xbbbaagxxab |
1fec_A_265 | 1fec | A | 266 | 276 | HVVFESGAEAD | EEEETTS-EEE | bbbxaagxbbb |
1ffv_B_311 | 1ffv | B | 317 | 327 | LAATPDGKILG | EEE-TT--EEE | bbbbaagxxab |
1fus_*_76 | 1fus | - | 78 | 88 | VVINTNCEYAG | EEEETT--EEE | bbbxaavxxae |
1g99_A_40 | 1g99 | A | 42 | 52 | TQKKFDGKKLE | EEEETTS-EEE | bbbxaavxbbb |
1ges_A_242 | 1ges | A | 243 | 253 | TLELEDGRSET | EEEETTS-EEE | bxbbaagxbbb |
1gk9_B_177 | 1gk9 | B | 180 | 190 | YYADVNGNIGY | EEEETTS-EEE | bbbbaavxbbb |
1gpl_*_414 | 1gpl | - | 421 | 431 | IVETNVGKQFN | EEE-TTS-EEE | bbbxaavxbbx |
1gpp_A_99 | 1gpp | A | 111 | 121 | QKKAPDGRIVE | EEE-TTS-EEE | bbxxaavxxbx |
1gpr_*_69 | 1gpr | - | 71 | 81 | GLQSDGGREIL | EEEETTS-EEE | bbbxaavxxbb |
1gqz_A_58 | 1gqz | A | 61 | 70 | RIFNADGSEV. | EEEETTS-EE. | bbbxaavbxb. |
1h5r_A_147 | 1h5r | A | 149 | 159 | VEFDKNGTAIS | EEE-TTS-EEE | bbbxaavxxab |
1h6l_A_81 | 1h6l | A | 81 | 91 | AVYSLEGKMLH | EEEETT--EEE | bbbxaagxxab |
1i0v_A_76 | 1i0v | A | 78 | 88 | VVFNENNQLAG | EEEETT--EEE | bbbbaavxxae |
1i82_A_94 | 1i82 | A | 97 | 107 | FRVNYMNEQTF | EEEETT--EEE | bbbxaavxxbb |
1iic_A_311 | 1iic | A | 315 | 325 | VVEQPDGKITD | EEE-TTS-EEE | bbbxaavxxab |
1iqy_A_384 | 1iqy | A | 388 | 398 | WYLYLDGTIEF | EEEETTS-EEE | bbbbaavxbbb |
1itw_A_194 | 1itw | A | 199 | 209 | ELIAKDGSSTV | EEEETTS-EEE | bbbxaagpbbx |
1itw_A_433 | 1itw | A | 436 | 446 | RVTDESGKLLL | EEEETT--EEE | bbbxaavxxab |
1iw7_C_838 | 1iw7 | C | 838 | 848 | KLANRHGNKGV | EEEETTS-EEE | bbbxaagxbbb |
1iyk_A_316 | 1iyk | A | 320 | 330 | VVEDENGIITD | EEE-TTS-EEE | bbbxaavxxab |
1iyx_A_18 | 1iyx | A | 23 | 33 | EVYTESGAFGR | EEEETTS-EEE | bbbxaagxbbb |
1jdr_A_221 | 1jdr | A | 222 | 231 | QWDSKSGYMM. | EEEETTS-EE. | bxbbaavbbb. |
1jkf_A_114 | 1jkf | A | 117 | 127 | LGIDAEGNDVY | EE--TTS--EE | aebbaavxpbb |
1jof_A_168 | 1jof | A | 172 | 182 | HRKLASGEVEL | EEE-TTS-EEE | bbxxaagxbbx |
1jof_A_283 | 1jof | A | 287 | 297 | FKLRDCGSIEK | EEE-TTS-EEE | bbbxaagxxab |
1jtk_A_26 | 1jtk | A | 29 | 39 | ALLTKDGKVYR | EEEETTS-EEE | bbbxaavxbbx |
1ju3_A_459 | 1ju3 | A | 465 | 475 | VDVFPDGRAIA | EEE-TTS-EEE | bbxxaagpbxx |
1jvw_A_88 | 1jvw | A | 93 | 103 | TGRLRDGTVFD | EEE-TTS-EEE | bbbxaavpxab |
1jz7_A_309 | 1jz7 | A | 314 | 324 | ELHTADGTLIE | EEEETTS-EEE | bbbxaagxxab |
1jz7_A_847 | 1jz7 | A | 856 | 866 | YRIDGSGQMAI | EEEETTS-EEE | bbbbaavxbxb |
1k2x_B_275 | 1k2x | B | 278 | 287 | IAIDHEGNVA. | EEEETT--EE. | bbbxaavxbb. |
1k2y_X_248 | 1k2y | X | 249 | 258 | GVVTNTGTII. | EEEETT--EE. | xbbxaavxxb. |
1k32_A_647 | 1k32 | A | 649 | 659 | MVRKDDGKIYT | EEEETTS-EEE | bbbbaavxxbb |
1k3b_A_49 | 1k3b | A | 49 | 59 | TAYDDLGNSGH | EEEETT--EEE | xbbbaavxbbb |
1kcf_A_52 | 1kcf | A | 57 | 67 | ASQNEDSKVII | EEE-TTS-EEE | bbxxaavxxbx |
1kcz_A_52 | 1kcz | A | 56 | 66 | LLVLEDGQVAH | EEEETTS-EEE | bbxxaavxbxb |
1khb_A_361 | 1khb | A | 361 | 369 | .AETSDGGVY. | .EEETTS-EE. | .xbxaavbbb. |
1kho_A_275 | 1kho | A | 279 | 289 | GIKTKDGQTQE | EEEETTS-EEE | bbbxaavxbbb |
1kop_A_108 | 1kop | A | 113 | 123 | VHLDENKQPLV | EEE-TT--EEE | xbbxaavxwbb |
1ky9_A_110 | 1ky9 | A | 114 | 124 | KVQLSDGRKFD | EEEETTS-EEE | bbbxaagpbbx |
1ky9_A_213 | 1ky9 | A | 213 | 223 | ALVNLNGELIG | EEE-TTS-EEE | xbbxaavxxae |
1lml_*_226 | 1lml | - | 230 | 240 | CQTFSDGHPAV | EEE-TTS-EEE | abbxaavxwab |
1lpb_B_415 | 1lpb | B | 421 | 431 | IVETNVGKQFN | EEEETTS-EEE | bxbxaavxbbb |
1lsw_A_155 | 1lsw | A | 157 | 167 | IVIDGHGIIQL | EEEETTSBEEE | bbbxaavxxab |
1lya_B_207 | 1lya | B | 212 | 221 | QVEVASGLTL. | EEEETTS-EE. | bbbbaagpbb. |
1m2t_A_53 | 1m2t | A | 57 | 67 | ELTNAGGDTIT | EEEETTS-EEE | bbbxaavxbbb |
1m6i_A_378 | 1m6i | A | 380 | 390 | LIKLKDGRKVE | EEEETTS-EEE | bbbbaagxbbb |
1mdb_A_409 | 1mdb | A | 415 | 425 | VRLTRDGYIVV | EEE-TTS-EEE | bbbxaavxbbx |
1mo9_A_277 | 1mo9 | A | 281 | 291 | IEEDANGRVQA | EEE-TTSBEEE | bxbxaavbpab |
1mpy_A_175 | 1mpy | A | 179 | 189 | QVLDENGTRVA | EEE-TT--EEE | bbbxaavxxab |
1msw_D_418 | 1msw | D | 418 | 428 | YNMDWRGRVYA | EEEETTS-EEE | bbbxaagpxbx |
1n1a_A_52 | 1n1a | A | 58 | 68 | TGWLLDGTKFD | EEEETTS-EEE | bbbxaavxxab |
1n62_B_314 | 1n62 | B | 320 | 330 | LAATKDGKILA | EEE-TT--EEE | bbbxaavxxab |
1n8j_A_119 | 1n8j | A | 122 | 132 | FVVDPQGIIQA | EEE-TTSBEEE | bxbxaavxxab |
1nm8_A_306 | 1nm8 | A | 308 | 318 | FIVAEDGSCGL | EEEETTS-EEE | xbbxaagxbeb |
1now_A_180 | 1now | A | 180 | 189 | .YQDSYGTFTI | .EE-TTS-EEE | .bbxaavxxbb |
1nui_A_104 | 1nui | A | 110 | 120 | DYRDQNGNIVS | EEE-TTS-EEE | xxxxaalxxab |
1nui_A_118 | 1nui | A | 122 | 132 | KVRDKDKNFKT | EEE-TT---EE | bbbbaavbxbb |
1nui_A_26 | 1nui | A | 26 | 36 | NSLFSDGHTFC | EEEETTS-EEE | bbbbaagxbbb |
1o20_A_95 | 1o20 | A | 98 | 108 | SWVREDGLRIA | EEE-TTS-EEE | bbbxaavxxbb |
1o6y_A_144 | 1o6y | A | 144 | 154 | IMISATNAVKV | EEEETTS-EEE | bbbxaavxxbx |
1oac_A_468 | 1oac | A | 472 | 482 | WIFHENGTIGI | EEEETTS-EEE | bbxbaavxbbb |
1ocv_A_98 | 1ocv | A | 101 | 111 | FRFNGAGKVVS | EEE-TTS-EEE | bbbxaavxxab |
1od4_A_1537 | 1od4 | A | 1542 | 1552 | LIEDENGELTE | EEE-TTS-EEE | bbxxaavxxbx |
1ofg_A_252 | 1ofg | A | 256 | 266 | QMRFRSGALSH | EEEETTS-EEE | bbbbaagxbbb |
1oja_A_245 | 1oja | A | 246 | 256 | LVETLNHEMYE | EEEETTS-EEE | bbbbaavbbbb |
1omw_A_618 | 1omw | A | 621 | 631 | LLKIRGGKQFV | EEEETTS-EEE | xbxbaavxbbb |
1onf_A_250 | 1onf | A | 251 | 261 | SIHLSDGRIYE | EEEETTS-EEE | bbbbaagxbbx |
1onw_A_356 | 1onw | A | 357 | 367 | LVMTPELRIEQ | EEE-TT--EEE | bbbxaavbxab |
1oql_A_53 | 1oql | A | 57 | 67 | ELTNQGGDSIT | EEEETT--EEE | bbbxaavxbbb |
1p0z_A_56 | 1p0z | A | 58 | 68 | TVGDASGQRLY | EEEETTSBEEE | bbbxaavxxab |
1p16_A_84 | 1p16 | A | 88 | 98 | FLVTRENDYYF | EEEETT--EEE | bbbxaavbbbx |
1p4k_A_255 | 1p4k | A | 258 | 268 | IALNKKGEYGA | EEEETTS-EEE | bbbbaavxbbb |
1p7t_A_197 | 1p7t | A | 199 | 209 | RIQLKNGKETT | EEEETTS-EEE | bbxbaavxbbb |
1p7t_A_317 | 1p7t | A | 318 | 328 | HYTAADGSEIS | EEEETTS-EEE | bbxxaavxxbb |
1p9s_A_111 | 1p9s | A | 113 | 123 | ILACYDGCAQG | EEEESSSSEEE | bbxbaavbpab |
1prx_A_133 | 1prx | A | 135 | 145 | FVFGPDKKLKL | EEE-TTSBEEE | bbbxaavxxab |
1psq_A_128 | 1psq | A | 130 | 140 | FVLDTDNTIRY | EEE-TT-BEEE | bbxxaavxxab |
1qdl_A_359 | 1qdl | A | 362 | 372 | GFISADGNAEF | EEEETTS-EEE | ebbxaavxbbb |
1qht_A_593 | 1qht | A | 595 | 605 | AVIDEEGKITT | EEE-TT---EE | bbbbaagpxbb |
1qi9_A_528 | 1qi9 | A | 529 | 539 | IKLFQDGTFTI | EEEETTS-EEE | bbbbaagxbbb |
1qj5_A_36 | 1qj5 | A | 36 | 46 | ELILSDGRRLV | EEEETTS-EEE | bbbxaavxxbx |
1rds_*_75 | 1rds | - | 77 | 87 | VIFNGDDELAG | EEEETT--EEE | xbbbaavbxae |
1rfs_*_131 | 1rfs | - | 131 | 140 | .QYNNQGRVVR | .EEETT--EEE | .bbxaavxxab |
1rie_*_163 | 1rie | - | 163 | 173 | SHYDASGRIRK | EEEETT--EEE | xbbxaavxxab |
1ryp_2_117 | 1ryp | 2 | 120 | 129 | RYVNLLGVTY. | EEEETT--EE. | bbbbaavxbb. |
1ryp_H_107 | 1ryp | H | 111 | 121 | YTIPLGGSVHK | EEE-TTS--EE | bbbxaagxbbx |
1ryp_L_109 | 1ryp | L | 113 | 123 | YYVDSDGTRLK | EEEETT--EEE | bxbbaagxbbx |
1sll_*_147 | 1sll | - | 151 | 161 | IYITNSGGIGI | EEEETTS-EEE | bbbbaavxbbb |
1sll_*_447 | 1sll | - | 451 | 461 | FRVDGEYNLYQ | EEE-TT-BEEE | bbbxaavxxbb |
1svp_A_239 | 1svp | A | 245 | 255 | VTWNSKGKTIK | EEE-TT--EEE | bbbxaavxxbb |
1udn_A_185 | 1udn | A | 189 | 199 | VVGTGSGRLSE | EEEETTS-EEE | bbbbaavxbab |
1uek_A_2 | 1uek | A | 16 | 26 | RFRREDGYHEL | EEE-TTSSEEE | abxxaavxxxb |
1umw_A_422 | 1umw | A | 424 | 434 | GYQLCDNSVGV | EEEETTS-EEE | xbbxaavxbbb |
1umw_A_432 | 1umw | A | 433 | 443 | GVLFNDSTRLI | EEEETTS-EEE | bbbxaavxbbb |
1umw_A_520 | 1umw | A | 522 | 532 | ILHLSNGSVQI | EEEETTS-EEE | bbbxaavxbbb |
1unn_C_285 | 1unn | C | 289 | 299 | KLKFDDFQQTT | EEEETTS-EEE | bbbbaavxbbb |
1ute_A_283 | 1ute | A | 286 | 296 | TYIEASGKSLF | EEEETTS-EEE | bxbxaavxxab |
1yat_*_21 | 1yat | - | 27 | 37 | TGTLENGQKFD | EEEETTS-EEE | bbbxaagxxab |
1zfj_A_187 | 1zfj | A | 189 | 199 | PLVDNSGRLSG | EEE-TTSBEEE | xbbxaavxxae |
2acy_*_36 | 2acy | - | 39 | 49 | VQNTDQGTVQG | EEE-TTS-EEE | bbxbaavbbbe |
2bbk_H_178 | 2bbk | H | 180 | 190 | FMHCRDGSLAK | EEEETTS-EEE | bbbxaagxbbx |
2blt_A_202 | 2blt | A | 202 | 209 | ..GYRDGKAV. | ..EESSSSEE. | ..xbFavxxb. |
2oat_A_69 | 2oat | A | 69 | 79 | YLWDVEGRKYF | EEEETT--EEE | bbbxaavxbbx |
2ovw_A_266 | 2ovw | A | 272 | 282 | FVANKQGDLIE | EEE-TTS-EEE | bxbxaavxxab |
2pva_A_69 | 2pva | A | 69 | 79 | DGVNEKGLMGA | EEEETTS-EEE | bebbaavxbbb |
2scu_B_193 | 2scu | B | 201 | 211 | LVITKQGDLIC | EEEETTS-EEE | xbxxaavbxbx |
2sfa_*_19 | 2sfa | - | 20 | 30 | NVRSSSGATYA | EEEETTS-EEE | xbbxaavxbbb |
3cms_*_238 | 3cms | - | 238 | 247 | .TQNQYGEFDI | .EEETTTEEEE | .bxxaavbbbb |
3pmg_A_489 | 3pmg | A | 490 | 500 | RLIFADGSRII | EEEETTS-EEE | bbxxaagxbbb |
4gsa_A_51 | 4gsa | A | 51 | 61 | YAWDVDGNRYI | EEEETTS-EEE | bbbxaavxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1f3z_*_76 | 1f3z | * | ZNINCLUDES GLU 148 FROM A NEIGHBORING MOLECULE AND ONE SOLVENT MOLECULE. | H - 90 |
Clusters included in this Subclass |